Cinnamoyl CoA-reductase (CCR) and caffeic acid O-methyltransferase (COMT) catalyze key steps in the biosynthesis of monolignols, which serve as building blocks in the formation of plant lignin. We identified candidate genes encoding these two enzymes in perennial ryegrass (Lolium perenne) and show that the spatio-temporal expression patterns of these genes in planta correlate well with the developmental profile of lignin deposition. Downregulation of CCR1 and caffeic acid O-methyltransferase 1 (OMT1) using an RNA interference–mediated silencing strategy caused dramatic changes in lignin level and composition in transgenic perennial ryegrass plants grown under both glasshouse and field conditions. In CCR1-deficient perennial ryegrass plants, metabolic profiling indicates the redirection of intermediates both within and beyond the core phenylpropanoid pathway. The combined results strongly support a key role for the OMT1 gene product in the biosynthesis of both syringyl- and guaiacyl-lignin subunits in perennial ryegrass. Both field-grown OMT1-deficient and CCR1-deficient perennial ryegrass plants showed enhanced digestibility without obvious detrimental effects on either plant fitness or biomass production. This highlights the potential of metabolic engineering not only to enhance the forage quality of grasses but also to produce optimal feedstock plants for biofuel production.
Delay of leaf senescence through genetic modification can potentially improve crop yield, through maintenance of photosynthetically active leaves for a longer period. Plant growth hormones such as cytokinin regulate and delay leaf senescence. Here, the structural gene (IPT) encoding the cytokinin biosynthetic enzyme isopentenyltransferase was fused to a functionally active fragment of the AtMYB32 promoter and was transformed into canola plants. Expression of the AtMYB32xs::IPT gene cassette delayed the leaf senescence in transgenic plants grown under controlled environment conditions and field experiments conducted for a single season at two geographic locations. The transgenic canola plants retained higher chlorophyll levels for an extended period and produced significantly higher seed yield with similar growth and phenology compared to wild type and null control plants under rainfed and irrigated treatments. The yield increase in transgenic plants was in the range of 16% to 23% and 7% to 16% under rainfed and irrigated conditions, respectively, compared to control plants. Most of the seed quality parameters in transgenic plants were similar, and with elevated oleic acid content in all transgenic lines and higher oil content and lower glucosinolate content in one specific transgenic line as compared to control plants. The results suggest that by delaying leaf senescence using the AtMYB32xs::IPT technology, productivity in crop plants can be improved under water stress and well-watered conditions.
Increasing herbage biomass is the predominant objective for pasture plant breeding programs. Three types of field trials are commonly involved during forage plant breeding, i.e., individually spaced plants, row plot, and sward trials. Assessments of biomass production at individual plant, row plot, and sward plot levels are through visual scoring and/or cutting of biomass manually or mechanically. Both visual scoring and cutting of plants are laborious, time consuming, and costly. The development of sensor technology such as multispectral sensors and unmanned aircraft systems (UAS) provide the opportunity to accelerate the process of biomass evaluation and to increase throughput, improve resolution, and reduce time and cost. We tested either the handheld Trimble GreenSeeker® or Parrot Sequoia multispectral sensors attached to a 3DR Solo Quadcopter to assess biomass in perennial ryegrass field trials sown as spaced individual plants, row plots, and simulated sward plots. Significant correlations were observed between visual score and normalized difference vegetation index (NDVI) in a spaced plant field trial and between biomass yield and NDVI in row plot and sward trials (r = 0.12 ~ 0.93). NDVI obtained from multispectral sensors and UAS can replace visual scoring in spaced plant trials. It was also a valuable proxy for yield estimation in row plot and sward trials. These technologies will assist in transition for the forage grass breeding from pen and notepad to digital and data era.
Increasing the yield of perennial forage crops remains a crucial factor underpinning the profitability of grazing industries, and therefore is a priority for breeding programs. Breeding for high dry matter yield (DMY) in forage crops is likely to be enhanced with the development of genomic selection (GS) strategies. However, realising the full potential of GS will require an increase in the amount of phenotypic data and the rate at which it is collected. Therefore, phenotyping remains a critical bottleneck in the implementation of GS in forage species. Assessments of DMY in forage crop breeding include visual scores, sample clipping and mowing of plots, which are often costly and time-consuming. New ground- and aerial-based platforms equipped with advanced sensors offer opportunities for fast, nondestructive and low-cost, high-throughput phenotyping (HTP) of plant growth, development and yield in a field environment. The workflow of image acquisition, processing and analysis are reviewed. The “big data” challenges, proposed storage and management techniques, development of advanced statistical tools and methods for incorporating the HTP into forage breeding systems are also reviewed. Initial results where these techniques have been applied to forages have been promising but further research and development is required to adapt them to forage breeding situations, particularly with respect to the management of large data sets and the integration of information from spaced plants to sward plots. However, realizing the potential of sensor technologies combined with GS leads to greater rates of genetic gain in forages.
Sensor-based phenotyping technologies may offer a non-destructive, high-throughput and efficient assessment of herbage yield (HY) to replace current inefficient phenotyping methods. This paper assesses the feasibility of combining normalised difference vegetative index (NDVI) from multispectral imaging and ultrasonic sonar estimates of plant height to estimate HY of single plants in a large perennial ryegrass breeding program. For sensor calibration, fresh HY (FHY) and dry HY (DHY) were acquired destructively, and plant height was measured at four dates each in 2017 and 2018 from a selected subset of 480 plants. Global multiple linear regression models based on K-fold and random split cross-validation methods were used to evaluate the relationship between observed vs. predicted HY. The coefficient of determination (R2) = 0.67–0.68 and a root mean square error (RMSE) between 5.43–7.60 g was obtained for the validation of predicted vs. observed DHY. The mean absolute error (MAE) and mean percentage error (MPE) ranged between 3.59–5.44 g and 22–28%, respectively. For the FHY, R2 values ranged from 0.63 to 0.70, with an RMSE between 23.50 and 33 g, MAE between 15.11 and 24.34 g and MPE between ~22% and 31%. Combining NDVI and plant height is a robust method to enable high-throughput phenotyping of herbage yield in perennial ryegrass breeding programs.