Aadil Javed

Dr. Aadil Javed

Department of Bioengineering, Ege University, İzmir, Turkey (Türkiye)
orcid
Actively looking for Post-Doctoral positions in the field of...

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
Verified
Journal Article
Open access
PDF file
Aadil JavedAadil Javed
Aadil Javed
MYMahdieh Yarmohammadi
Mahdieh Yarmohammadi
KKKemal Sami Korkmaz
Kemal Sami Korkmaz
TRTeresa Rubio-Tomás
Teresa Rubio-Tomás
Gastric cancer predominantly occurs in adenocarcinoma form and is characterized by uncontrolled growth and metastases of gastric epithelial cells. The growth of gastric cells is regulated by the action of several major cell cycle regulators including Cyclins and Cyclin-dependent kinases (CDKs), which act sequentially to modulate the life cycle of a living cell. It has been reported that inadequate or over-activity of these molecules leads to disturbances in cell cycle dynamics, which consequently results in gastric cancer development. Manny studies have reported the key roles of Cyclins and CDKs in the development and progression of the disease in either in vitro cell culture studies or in vivo models. We aimed to compile the evidence of molecules acting as regulators of both Cyclins and CDKs, i.e., upstream regulators either activating or inhibiting Cyclins and CDKs. The review entails an introduction to gastric cancer, along with an overview of the involvement of cell cycle regulation and focused on the regulation of various Cyclins and CDKs in gastric cancer. It can act as an extensive resource for developing new hypotheses for future studies.

17 March 2022 in Biomolecules
Verified
Journal Article
Open access
PDF file
Gianluca Malagraba PapadopoulosGianluca Malagraba Papadopoulos
Gianluca Malagraba Papadopoulos
MYMahdieh Yarmohammadi
Mahdieh Yarmohammadi
Aadil JavedAadil Javed
Aadil Javed
CBCARLES BARCELÓ
CARLES BARCELÓ
TRTeresa Rubio-Tomás
Teresa Rubio-Tomás
Epigenetic mechanisms are known to play a key role in cancer progression. Specifically, histone methylation involves reversible post-translational modification of histones that govern chromatin structure remodelling, genomic imprinting, gene expression, DNA damage repair, and meiotic crossover recombination, among other chromatin-based activities. Demethylases are enzymes that catalyse the demethylation of their substrate using a flavin adenine dinucleotide-dependent amine oxidation process. Lysine-specific demethylase 1 (LSD1) and its homolog, lysine-specific demethylase 2 (LSD2), are overexpressed in a variety of human cancer types and, thus, regulate tumour progression. In this review, we focus on the literature from the last 5 years concerning the role of LSD1 and LSD2 in the main gastrointestinal cancers (i.e., gastric cancer, liver cancer, pancreatic cancer, and colorectal cancer).

9 April 2020 in Eurasian Journal of Medicine and Oncology
Verified
Journal Article
Closed access
PDF file
FÖFadime Öztoprak
Fadime Öztoprak
Aadil JavedAadil Javed
Aadil Javed
Objectives: SARS-CoV-2, which belongs to the Coronaviridae family of RNA viruses, caused an epidemic in China, leading to the pandemic of COVID-19. Various international and national authorities around the world have been attempting to halt the spread of the deadly virus by providing awareness of the disease including daily confirmed cases and deaths related to the pandemic. At this early stage of the outbreak, epidemiological patterns are required for healthcare officials and public, to understand the ongoing situation. The case fatality rate is one of the key parameters for the epidemiology of this type of epidemic. In this study, we aimed to compute the CFR for European countries and Turkey until 31st March 2020. Methods: We used linear regression analysis on the cumulative number of cases and deaths to generate a slope to estimate CFR values of COVID-19 in selected countries. We compared the calculated CFR values of Turkey until 31st March (15 days since first COVID-19 death) with similar first fifteen days’ data since the report of first death from Italy, Spain, the UK, France, Germany, Switzerland, Belgium, Austria, the Netherlands and Portugal. We then calculated CFR values for these countries from their cumulative confirmed cases and cumulative deaths up to March 31st. Results: Based on This data-driven analysis showed that CFR for Turkey was 1.85 (95% CI: 1.513-2.181) with an R2 value of 0.92 which was comparable to fa ifteen day analysis of France as 1.979 (95% CI: 1.798-2.159) and an R2 value of 0.98. However, CFRs for selected countries increased in subsequent analysis when the threshold of fifteen days was released until March 31, 2020. However, the CFR estimates are time-dependent and show a linear trend in the initial stages of the outbreak. Results: Based on This data-driven analysis showed that CFR for Turkey was 1.85 (95% CI: 1.513-2.181) with an R2 value of 0.92 which was comparable to fa ifteen day analysis of France as 1.979 (95% CI: 1.798-2.159) and an R2 value of 0.98. However, CFRs for selected countries increased in subsequent analysis when the threshold of fifteen days was released until March 31, 2020. However, the CFR estimates are time-dependent and show a linear trend in the initial stages of the outbreak. Conclusions: Our findings suggest that the CFR of COVID-19 in Turkey at initial stages of the outbreak was similar to France. However, SARS-CoV-2 seemed to have spread quicker in Turkey since the report of first death, as compared to other countries based on the number of confirmed cases. This study was aimed at recording an update on the current epidemiological situation of COVID-19 for Turkey in comparison to European countries during a global pandemic.

Verified
Journal Article
Open access
PDF file
DJDiego J. Jiménez
Diego J. Jiménez
Aadil JavedAadil Javed
Aadil Javed
TRTeresa Rubio-Tomás
Teresa Rubio-Tomás
NSNdioba Seye-Loum
Ndioba Seye-Loum
CBCARLES BARCELÓ
CARLES BARCELÓ
Pancreatic ductal adenocarcinoma (PDAC) is one of the leading causes of cancer-related death worldwide. It is commonly diagnosed in advanced stages and therapeutic interventions are typically constrained to systemic chemotherapy, which yields only modest clinical outcomes. In this review, we examine recent developments in targeted therapy tailored to address distinct molecular pathway alteration required for PDAC. Our review delineates the principal signaling pathways and molecular mechanisms implicated in the initiation and progression of PDAC. Subsequently, we provide an overview of prevailing guidelines, ongoing investigations, and prospective research trajectories related to targeted therapeutic interventions, drawing insights from randomized clinical trials and other pertinent studies. This review focus on a comprehensive examination of preclinical and clinical data substantiating the efficacy of these therapeutic modalities, emphasizing the potential of combinatorial regimens and novel therapies to enhance the quality of life for individuals afflicted with PDAC. Lastly, the review delves into the contemporary application and ongoing research endeavors concerning targeted therapy for PDAC. This synthesis serves to bridge the molecular elucidation of PDAC with its clinical implications, the evolution of innovative therapeutic strategies, and the changing landscape of treatment approaches.

12 August 2021 in Cell Cycle
Verified
Journal Article
Closed access
LVLokman Varisli
Lokman Varisli
Aadil JavedAadil Javed
Aadil Javed
BOBilge Esin Ozturk
Bilge Esin Ozturk
GAGencer Kaan Akyuz
Gencer Kaan Akyuz
GTGizem Gülevin Takir
Gizem Gülevin Takir
KKKemal Sami Korkmaz
Kemal Sami Korkmaz
Prostate cancer is one of the most common cancer for men worldwide with advanced forms showing supernumerary or clustered centrosomes. Hematological and neurological expressed 1 (HN1) also known as Jupiter Microtubule Associated Homolog 1 (JPT1) belongs to a small poorly understood family of genes that are evolutionarily conserved across vertebrate species. The co-expression network of HN1 from the TCGA PRAD dataset indicates the putative role of HN1 in centrosome-related processes in the context of prostate cancer. HN1 expression is low in normal RWPE-1 cells as compared to cancerous androgen-responsive LNCaP and androgen insensitive PC-3 cells. HN1 overexpression resulted in differential response for cell proliferation and cell cycle changes in RWPE-1, LNCaP, and PC-3 cells. Since HN1 overexpression increased the proliferation rate in PC-3 cells, these cells were used for functional characterization of HN1 in advanced prostate carcinogenesis. Furthermore, alterations in HN expression led to an increase in abnormal to normal nuclei ratio and increased chromosomal aberrations in PC-3 cells. We observed the co-localization of HN1 with γ-tubulin foci in prostate cancer cells, further validated by immunoprecipitation. HN1 was observed as physically associated with γ-tubulin and its depletion led to increased γ-tubulin foci and disruption in microtubule spindle assembly. Higher HN1 expression was correlated with prostate cancer as compared to normal tissues. The restoration of HN1 expression after silencing suggested that it has a role in centrosome clustering, implicating a potential role of HN1 in cell division as well as in prostate carcinogenesis warranting further studies.

26 January 2023 in Biology
Verified
Journal Article
Open access
PDF file
Aadil JavedAadil Javed
Aadil Javed
GÖGülseren Özduman
Gülseren Özduman
LVLokman Varisli
Lokman Varisli
BÖBilge Esin Öztürk
Bilge Esin Öztürk
KKKemal Sami Korkmaz
Kemal Sami Korkmaz
HN1 has previously been shown as overexpressed in various cancers. In Prostate cancer, it regulates AR signaling and centrosome-related functions. Previously, in two different studies, HN1 expression has been observed as inversely correlated with Cyclin B1. However, HN1 interacting partners and the role of HN1 interactions in cell cycle pathways have not been completely elucidated. Therefore, we used Prostate cancer cell lines again and utilized both transient and stable inducible overexpression systems to delineate the role of HN1 in the cell cycle. HN1 characterization was performed using treatments of kinase inhibitors, western blotting, flow cytometry, immunofluorescence, cellular fractionation, and immunoprecipitation approaches. Our findings suggest that HN1 overexpression before mitosis (post-G2), using both transient and stable expression systems, leads to S-phase accumulation and causes early mitotic exit after post-G2 overexpression. Mechanistically, HN1 interacted with Cyclin B1 and increased its degradation via ubiquitination through stabilized Cdh1, which is a co-factor of the APC/C complex. Stably HN1-expressing cells exhibited a reduced Cdt1 loading onto chromatin, demonstrating an exit from a G1 to S phenotype. We found HN1 and Cdh1 interaction as a new regulator of the Cyclin B1/CDK1 axis in mitotic regulation which can be explored further to dissect the roles of HN1 in the cell cycle.