Asiye Esra EREN EROĞLU

Dr. Asiye Esra EREN EROĞLU

orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 February 2024 in Microorganisms
Verified
Journal Article
Open access
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AEAsiye Esra EREN EROĞLU
Asiye Esra EREN EROĞLU
DEDr. Volkan Eroglu
Dr. Volkan Eroglu
İYİhsan Yaşa
İhsan Yaşa
A novel strain of Gram-negative, rod-shaped aerobic bacteria, identified as IY22, was isolated from the root nodules of Astragalus flavescens. The analysis of the 16S rDNA and recA (recombinase A) gene sequences indicated that the strain belongs to the genus Phyllobacterium. During the phylogenetic analysis, it was found that strain IY22 is closely related to P. trifolii strain PETP02T and P. bourgognense strain STM 201T. The genome of IY22 was determined to be 6,010,116 base pairs long with a DNA G+C ratio of 56.37 mol%. The average nucleotide identity (ANI) values showed a range from 91.7% to 93.6% when compared to its close relatives. Moreover, IY22 and related strains had digital DNA-DNA hybridization (dDDH) values ranging from 16.9% to 54.70%. Multiple genes (including nodACDSNZ, nifH/frxC, nifUS, fixABCJ, and sufABCDES) associated with symbiotic nitrogen fixation have been detected in strain IY22. Furthermore, this strain features genes that contribute to improving plant growth in various demanding environments. This study reports the first evidence of an association between A. flavescens and a rhizobial species. Native high-altitude legumes are a potential source of new rhizobia, and we believe that they act as a form of insurance for biodiversity against the threats of desertification and drought.


29 April 2024 in Microorganisms
Verified
Journal Article
Open access
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İYİhsan Yaşa
İhsan Yaşa
SESerap Evran
Serap Evran
AEAsiye Esra EREN EROĞLU
Asiye Esra EREN EROĞLU
CÖCengiz Önder
Cengiz Önder
MAMaryam Allahyari
Maryam Allahyari
MKMüberra Kullay
Müberra Kullay
Bacteriophages are currently considered one of the most promising alternatives to antibiotics under the ‘One Health’ approach due to their ability to effectively combat bacterial infections. This study aimed to characterize Vibrio species in hatchery water samples collected from an aquaculture farm and investigate the biocontrol potential of their bacteriophages. Vibrio spp. (n = 32) isolates confirmed by LNA probe-based qPCR were used as hosts. Three Vibrio phages were isolated. IKEM_vK exhibited a broad host range, infecting V. harveyi (n = 8), V. alginolyticus (n = 2), V. azureus (n = 1), and V. ordalii (n = 1). IKEM_v5 showed lytic activity against V. anguillarum (n = 4) and V. ordalii (n = 1), while IKEM_v14 was specific to V. scophtalmi (n = 4). The morphological appearance of phages and their lytic effects on the host were visualized using scanning electron microscopy (SEM). All three phages remained relatively stable within the pH range of 6–11 and up to 60 °C. The lytic activities and biofilm inhibition capabilities of these phages against planktonic Vibrio cells support their potential applications in controlling vibriosis in aquaculture systems.


9 April 2025 in Microorganisms
Verified
Journal Article
Open access
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AEAsiye Esra EREN EROĞLU
Asiye Esra EREN EROĞLU
KTKadriye Toklu
Kadriye Toklu
NSNazli Sarikahya
Nazli Sarikahya
İYİhsan Yaşa
İhsan Yaşa
The Gram-negative marine bacterium Photobacterium damselae subsp. piscicida (Pdp) is a pathogen responsible for pseudotuberculosis in various fish species, posing significant threats to aquaculture. Pdp employs strong virulence mechanisms, one of which is the production of the piscibactin siderophore, which plays a key role in iron acquisition from the host. In this study, we evaluated the ferrophilic properties of the Pdp strain EKL1 in relation to growth and biofilm production. In vitro iron limitation significantly suppressed biofilm formation and planktonic growth in EKL1. We then investigated the anti-biofilm activity of deferoxamine (DFO), an iron chelator used to treat transfusion-induced iron overload in thalassemia patients, against EKL1. DFO strongly inhibited EKL1 biofilm production (by 82.1%), suggesting that iron chelation therapy could be an effective strategy to prevent Pdp-induced photobacteriosis outbreaks. Finally, we characterized the iron-bound form of piscibactin through extensive spectroscopic analyses of the siderophore produced by EKL1. Our findings contribute to the development of novel piscibactin-targeted inhibitors, advancing siderophore-based anti-virulence strategies against Pdp.

1 January 2019 in Journal of Asian Scientific Research
Verified
Journal Article
Closed access
SSShadman Tariq Sadiq
Shadman Tariq Sadiq
IYIhsan Yasa
Ihsan Yasa
SAShaimaa Fatih Ali
Shaimaa Fatih Ali
AEAsiye Esra EREN EROĞLU
Asiye Esra EREN EROĞLU
ATArwa Noori Turky
Arwa Noori Turky