Nobumitsu Miyanishi

Prof. Nobumitsu Miyanishi

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Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 December 2015 in Carbohydrate Research
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Journal Article
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RHRisa Horiuchi
Risa Horiuchi
Naoki HirotsuNaoki Hirotsu
Naoki Hirotsu
NMNobumitsu Miyanishi
Nobumitsu Miyanishi

10 October 2024 in Discover Oceans
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Journal Article
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CKChisato Kataoka
Chisato Kataoka
RHRyo Horimoto
Ryo Horimoto
YIYuichi Iwasaki
Yuichi Iwasaki
HHHiroki Higashibata
Hiroki Higashibata
NMNobumitsu Miyanishi
Nobumitsu Miyanishi
Shosaku KashiwadaShosaku Kashiwada
Shosaku Kashiwada
The Japanese archipelago is surrounded by the Sea of Japan, the Sea of Okhotsk, the Pacific Ocean, and the East China Sea. The oceans are known to be contaminated by waste artifacts (marine litter). To investigate how these artifacts contaminate sandy beaches in Japan and their fate in the oceans, we sampled sand from 19 sandy beaches ranging from the western area of the main island of Japan (Honshu), which faces the Sea of Japan, to the westernmost island in the Japanese archipelago (Yonaguni Island), which faces the East China Sea. Almost all beaches were contaminated by marine litter. The maximum density by number of pieces was 604,600 per m3 in a 2-cm depth of sand on Yonaguni Island. Polystyrene foam was the most common artifact, and plastic fragments were second. The densities of artifacts by number and weight, and the type of artifacts, varied by location. A statistically significant positive relationship between the weights of artifacts and natural objects was observed, suggesting that they experience similar fates in the oceans. The major axis of the polystyrene foam in the Yonaguni area differed significantly from those in the Shimane, Tsushima, and Okinawa areas. The major axis in the Tsushima area significantly differed from those in all other studied areas. This study found the geological difference in the distribution and the major axis of polystyrene foams. These differences may be relevant to environmental physical factors (wind, rain, and waves), chemical alterations by ultraviolet rays, exposed time, the gyre, and local currents.

31 August 2024 in Marine Drugs
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RHRyuhei Hayashi
Ryuhei Hayashi
KKKenichi Kamata
Kenichi Kamata
Marco GerdolMarco Gerdol
Marco Gerdol
Yuki FujiiYuki Fujii
Yuki Fujii
THTakashi Hayashi
Takashi Hayashi
Yasuhiro OzekiYasuhiro Ozeki
Yasuhiro Ozeki
We here report the purification of a novel member of the galectin family, the β-galactoside-binding lectin hRTL, from the marine sponge Chondrilla australiensis. The hRTL lectin is a tetrameric proto-type galectin with a subunit molecular weight of 15.5 kDa, consisting of 141 amino acids and sharing 92% primary sequence identity with the galectin CCL from the congeneric species C. caribensis. Transcriptome analysis allowed for the identification of additional sequences belonging to the same family, bringing the total number of hRTLs to six. Unlike most other galectins, hRTLs display a 23 amino acid-long signal peptide that, according to Erdman degradation, is post-translationally cleaved, leaving an N-terminal end devoid of acetylated modifications, unlike most other galectins. Moreover, two hRTLs display an internal insertion, which determines the presence of an unusual loop region that may have important functional implications. The characterization of the glycan-binding properties of hRTL revealed that it had high affinity towards TF-antigen, sialyl TF, and type-1 N-acetyl lactosamine with a Galβ1-3 structure. When administered to DLD-1 cells, a colorectal carcinoma cell line expressing mucin-associated TF-antigen, hRTL could induce glycan-dependent cytotoxicity.

1 August 2016 in Biochemical and Biophysical Research Communications
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RHRisa Horiuchi
Risa Horiuchi
Naoki HirotsuNaoki Hirotsu
Naoki Hirotsu
NMNobumitsu Miyanishi
Nobumitsu Miyanishi

17 January 2018 in Scientific Reports
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RHRisa Horiuchi
Risa Horiuchi
YNYukari Nakajima
Yukari Nakajima
SKShosaku Kashiwada
Shosaku Kashiwada
NMNobumitsu Miyanishi
Nobumitsu Miyanishi
Silver nanomaterials have been mainly developed as antibacterial healthcare products worldwide, because of their antibacterial activity. However, there is little data regarding the potential risks and effects of large amounts of silver nanomaterials on plants. In contrast, N-glycans play important roles in various biological phenomena, and their structures and expressions are sensitive to ambient environmental changes. Therefore, to assesse the effects of silver nanomaterials, we focused on the correlation between N-glycans and the effects of silver nanomaterials in plants and analyzed N-glycan structures in Oryza sativa seedlings exposed to silver nanocolloids (SNCs). The phenotype analysis showed that the shoot was not affected by any SNC concentrations, whereas the high SNC exposed root was seriously damaged. Therefore, we performed comparative N-glycan analysis of roots. As a result, five of total N-glycans were significantly increased in SNC exposed roots, of which one was a free-N-glycan with one beta-N-acetylglucosamine residue at the reducing end. Our results suggest that the transition of plant complex type N-glycans, including free-N-glycans, was caused by abnormalities in O. sativa development, and free-N-glycan itself has an important role in plant development. This study originally adapted glycome transition analysis to environmental toxicology and proposed a new category called “Environmental glycobiology”.

11 June 2024 in Marine Drugs
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Yuki FujiiYuki Fujii
Yuki Fujii
KKKenichi Kamata
Kenichi Kamata
Marco GerdolMarco Gerdol
Marco Gerdol
Imtiaj HasanImtiaj Hasan
Imtiaj Hasan
SRSultana Rajia
Sultana Rajia
HFHideaki Fujita
Hideaki Fujita
SeviL, a galactoside-binding lectin previously isolated from the mussel Mytilisepta virgata, was demonstrated to trigger apoptosis in HeLa ovarian cancer cells. Here, we show that this lectin can promote the polarization of macrophage cell lines toward an M1 functional phenotype at low concentrations. The administration of SeviL to monocyte and basophil cell lines reduced their growth in a dose-dependent manner. However, low lectin concentrations induced proliferation in the RAW264.7 macrophage cell line, which was supported by the significant up-regulation of TOM22, a component of the mitochondrial outer membrane. Furthermore, the morphology of lectin-treated macrophage cells markedly changed, shifting from a spherical to an elongated shape. The ability of SeviL to induce the polarization of RAW264.7 cells to M1 macrophages at low concentrations is supported by the secretion of proinflammatory cytokines and chemokines, as well as by the enhancement in the expression of IL-6- and TNF-α-encoding mRNAs, both of which encode inflammatory molecular markers. Moreover, we also observed a number of accessory molecular alterations, such as the activation of MAP kinases and the JAK/STAT pathway and the phosphorylation of platelet-derived growth factor receptor-α, which altogether support the functional reprogramming of RAW264.7 following SeviL treatment. These results indicate that this mussel β-trefoil lectin has a concentration-dependent multifunctional role in regulating cell proliferation, phenotype, and death in macrophages, suggesting its possible involvement in regulating hemocyte activity in vivo.