Mohamed Aboubakr

Dr. Mohamed Aboubakr

Agricultural Research Center
orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Verified
Journal Article
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OKOmar Khadrawy
Omar Khadrawy
SGSamuel Gebremedhn
Samuel Gebremedhn
DWDessie Salilew Wondim
Dessie Salilew Wondim
MAMohamed Aboubakr
Mohamed Aboubakr
CNChristiane Neuhof
Christiane Neuhof
DTDawit Tesfaye
Dawit Tesfaye
Nrf2 is a redox sensitive transcription factor regulating the expression of antioxidant genes as defense mechanism against various stressors. The aim of this study is to investigate the potential role of noncoding miRNAs as endogenous and quercetin as exogenous regulators of Nrf2 pathway in bovine granulosa cells. For this cultured granulosa cells were used for modulation of miRNAs (miR-28, 153 and miR-708) targeting the bovine Nrf2 and supplementation of quercentin to investigate the regulatory mechanisms of the Nrf2 antioxidant system. Moreover, cultured cells were treated with hydrogen peroxide to induce oxidative stress in those cells. Our results showed that, oxidative stress activated the expression of Nrf2 as a defense mechanism, while suppressing the expression of those miRNAs. Overexpression of those miRNAs resulted in downregulation of Nrf2 expression resulted in higher ROS accumulation, reduced mitochondrial activity and cellular proliferation. Quercetin supplementation showed its protective role against oxidative stress induced by H2O2 by inducing the expression of antioxidant enzymes. In conclusion, this study highlighted the involvement of miR-153, miR-28 and miR-708 in regulatory network of Nrf2 mediated antioxidant system in bovine granulosa cells function. Furthermore, quercetin at a low dose played a protective role in bovine granulosa cells against oxidative stress damage.

19 May 2021 in Cell and tissue research
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Journal Article
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MAMohamed Aboubakr
Mohamed Aboubakr
MSMohammed Saeed-Zidane
Mohammed Saeed-Zidane
SGSamuel Gebremedhn
Samuel Gebremedhn
DSDessie Salilew-Wondim
Dessie Salilew-Wondim
ETErnst Tholen
Ernst Tholen
DTDawit Tesfaye
Dawit Tesfaye
Transcription factors (TFs) are known to be involved in regulating the expression of several classes of genes during folliculogenesis. However, the regulatory role of TFs during oxidative stress (OS) is not fully understood. The current study was aimed to investigate the regulation of the TFs in bovine granulosa cells (bGCs) during exposure to OS induced by H2O2in vitro. For this, bGCs derived from ovarian follicles were cultured in vitro till their confluency and then treated with H2O2for 40 min. Twenty-four hours later, cells were subjected to various phenotypic and gene expression analyses for genes related to TFs, endoplasmic reticulum stress, apoptosis, cell proliferation, and differentiation markers. The bGCs exhibited higher reactive oxygen species accumulation, DNA fragmentation, and endoplasmic reticulum stress accompanied by reduction of mitochondrial activity after exposure to OS. In addition, higher lipid accumulation and lower cell proliferation were noticed in H2O2-challenged cells. The mRNA level of TFs includingNRF2,E2F1,KLF6,KLF9,FOS,SREBF1,SREBF2, andNOTCH1was increased in H2O2-treated cells compared with non-treated controls. However, the expression level ofKLF4and its downstream gene,CCNB1, were downregulated in the H2O2-challenged group. Moreover, targeted inhibition ofNRF2using small interference RNA resulted in reduced expression ofKLF9,FOS,SREBF2, andNOTCH1genes, while the expression ofKLF4was upregulated. Taken together, bovine granulosa cells exposed to OS exhibited differential expression of various transcription factors, which are mediated by the NRF2 signaling pathway.

27 November 2020 in Animals
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Ahmed A. A. Abdel-WarethAhmed A. A. Abdel-Wareth
Ahmed A. A. Abdel-Wareth
MKMohammed Al Kahtani
Mohammed Al Kahtani
KAkhalid Alsyaad
khalid Alsyaad
FSFatma Mohsen Shalaby
Fatma Mohsen Shalaby
Islam SaadeldinIslam Saadeldin
Islam Saadeldin
AEAhmed Ezzat
Ahmed Ezzat
The present study aimed to determine the effects of zinc oxide nanoparticles (ZnO-NPs), thyme oil (THO), or their combination on the nutrient digestibility coefficients, reproductive parameters, and some blood metabolites of male Californian rabbits. One hundred rabbits, 29-weeks of age (initial body weight 3.48 ± 0.08 kg) were randomly distributed into four groups, 25 rabbits each. Treatment groups were fed a control diet, a control diet supplemented with ZnO-NPs (100 mg/kg), THO (500 mg/kg), or combination of ZnO-NPs (100 mg/kg) and THO (500 mg/kg). The feeding trial lasted for 35 days. Results showed improvements in dry matter, crude protein, ether extract, and crude fiber in ZnO-NPs, THO, and their combination treated groups compared to those of control. Furthermore, semen volume, sperm motility, vitality, and morphology were significantly improved (p < 0.01) in ZnO-NPs and THO groups rather than the control. Both ZnO-NPs and THO, as either individual or combined treatments significantly improved the serum alanine amino-transferase (ALT), aspartate amino-transferase (AST), urea, and creatinine compared to the control. Moreover, serum concentrations of testosterone were significantly increased in rabbits supplemented with ZnO-NPs, THO, or their combination compared to those of control (p < 0.05). In conclusion, ZnO-NPs, THO, or their combination improved the digestibility of nutrients, liver/ kidney functions, semen characteristics, and testosterone concentration in male rabbits.
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22 September 2019 in Molecular Reproduction and Development
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MAMohamed Aboubakr
Mohamed Aboubakr
MSMohammed Saeed‐Zidane
Mohammed Saeed‐Zidane
SGSamuel Gebremedhn
Samuel Gebremedhn
DWDessie Salilew Wondim
Dessie Salilew Wondim
OKOmar Khdrawy
Omar Khdrawy
DTDawit Tesfaye
Dawit Tesfaye
Sexually dimorphic differences in genome activity, which is orchestrated by transcription factors (TFs), could explain the differential response of male and female embryos to environmental stressors. To proof this hypothesis, the expression of cellular and extracellular TFs was investigated in male and female bovine embryos in vitro cultured either under low (5%) or high (20%) oxygen levels. The intracellular reactive oxygen species (ROS), total cell number, expression of nuclear factor (erythroid‐derived 2) factor 2 (NFE2L2), Krüppel‐like factor 4 (KLF4), notch receptor 1 (NOTCH1), E2F transcription factor 1 (E2F1), and SREBF2 along with extracellular vesicles (EVs) biogenesis genes were assessed at the blastocyst stage and their released EVs. Low blastocyst rate in both sexes due to oxidative stress (OS) was accompanied by increased ROS accumulation and reduced cell number in female embryos. The messenger RNA and protein levels of NFE2L2, as well as KLF4 expression, were higher in male embryos exposed to OS compared with female embryos. However, the expression of NOTCH1 and E2F1 was higher in female embryos cultured in high oxygen level. Male embryos exposed to OS released more EVs enriched with NFE2L2, superoxide dismutase 1, and NOTCH1 accompanied by elevated expression of EVs biogenesis genes. Accordingly, differential expression of TFs and their release into spent media could partially explain the sexual dimorphic response of bovine embryos to environmental stresses.

4 June 2021 in Veterinary Sciences
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SISally Ibrahim
Sally Ibrahim
MHMohamed Hedia
Mohamed Hedia
MAMohamed Aboubakr
Mohamed Aboubakr
MDMohamed K. Derbala
Mohamed K. Derbala
KMkarima Mahmoud
karima Mahmoud
MEMohamed El-Belely
Mohamed El-Belely
So far the intimate link between serum microRNA (miRNA) and uterine inflammation in mares is unknown. We aimed (I) to investigate expression profile of eca-miR-155, eca-miR-223, eca-miR-17, eca-miR-200a, and eca-miR-205 (II) and to measure concentrations of interleukin 6 (IL-6), and prostaglandins (PGF2α and PGE2) in serum of mares with healthy and abnormal uterine status (endometritis). This study was conducted on 80 Arabian mares: young (4–7 years), and old (8–14 years). Mares were divided into 48 sub-fertile (endometritis) and 32 fertile (control) at stud farms. Serum was collected for measuring IL-6, PGF2α, and PGE2, as well as miRNA isolation and qRT-PCR. Concentrations of IL-6, PGE2, and PGF2α were higher in mares with endometritis compared to control. Age of mares had a remarkable effect on IL-6, PGE2, and PGF2α concentrations. Relative abundance of eca-miR-155, eca-miR-223, eca-miR-17, eca-miR-200a, and eca-miR-205 was higher in both young and old mares with endometritis. We noticed that eca-miR-155, eca-miR-223, eca-miR-200a, and eca-miR-205 revealed higher expression level in old than young mares with endometritis. This is the first study that has revealed the changes in cell free miRNA and serum inflammatory mediators during endometritis, and these findings could be used for a better understanding the pathophysiology mechanisms of endometritis in equine.

23 May 2026 in Agriculture
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Ahmed A. A. Abdel-WarethAhmed A. A. Abdel-Wareth
Ahmed A. A. Abdel-Wareth
Ahmed Abdelmoamen AhmedAhmed Abdelmoamen Ahmed
Ahmed Abdelmoamen Ahmed
MAMohamed Aboubakr
Mohamed Aboubakr
Md SalahuddinMd Salahuddin
Md Salahuddin
JLJayant Lohakare
Jayant Lohakare
The agricultural sector, particularly animal production, faces numerous unprecedented challenges driven by climate change, resource depletion, and an ever-growing global demand for quality food. These challenges are further compounded by the increasing environmental impact of livestock farming, including greenhouse gas emissions, overuse of water and land resources, and the destruction of vital ecosystems. Ensuring the sustainability of animal production systems while mitigating the negative environmental impacts of these factors is essential for future global food security. As the demand for animal-derived products continues to rise, there is a pressing need for innovations that can enhance productivity without compromising environmental integrity or animal welfare. Artificial intelligence (AI) has emerged as a transformative technology with the potential to revolutionize the animal production industry. AI-driven solutions offer promising avenues for optimizing production efficiency, enhancing animal health and welfare, and reducing the environmental footprint of livestock farming. Machine learning, sensor technologies, and advanced data analytics are being increasingly utilized to monitor and predict various aspects of animal farming, such as feed efficiency, disease prevention, and climate resilience. These technologies enable farmers to make data-driven decisions, fostering more sustainable and environmentally responsible practices. This review examines the integration of AI into animal production systems, emphasizing its applications in climate change mitigation, resource management, and advancing sustainability. The discussion addresses how AI technologies can be utilized to improve productivity while minimizing environmental impact and enhancing animal welfare. Additionally, the paper outlines future opportunities, challenges, and potential barriers to integrating AI technologies into livestock farming, thereby ensuring long-term sustainability amid global challenges.