Kousik Sundararajan

Dr. Kousik Sundararajan

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Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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8 April 2022 in Nature Methods
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NANicolas Altemose
Nicolas Altemose
AMAnnie Maslan
Annie Maslan
OSOwen K. Smith
Owen K. Smith
KSKousik Sundararajan
Kousik Sundararajan
RBRachel R. Brown
Rachel R. Brown
ASAaron Streets
Aaron Streets

23 June 2015 in Nature Communications
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Journal Article
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KSKousik Sundararajan
Kousik Sundararajan
AMAmanda Miguel
Amanda Miguel
SDSamantha M. Desmarais
Samantha M. Desmarais
EMElizabeth L. Meier
Elizabeth L. Meier
KHKerwyn Casey Huang
Kerwyn Casey Huang
EGErin D. Goley
Erin D. Goley
The bacterial GTPase FtsZ forms a cytokinetic ring at midcell, recruits the division machinery and orchestrates membrane and peptidoglycan cell wall invagination. However, the mechanism for FtsZ regulation of peptidoglycan metabolism is unknown. The FtsZ GTPase domain is separated from its membrane-anchoring C-terminal conserved (CTC) peptide by a disordered C-terminal linker (CTL). Here we investigate CTL function in Caulobacter crescentus. Strikingly, production of FtsZ lacking the CTL (ΔCTL) is lethal: cells become filamentous, form envelope bulges and lyse, resembling treatment with β-lactam antibiotics. This phenotype is produced by FtsZ polymers bearing the CTC and a CTL shorter than 14 residues. Peptidoglycan synthesis still occurs downstream of ΔCTL; however, cells expressing ΔCTL exhibit reduced peptidoglycan crosslinking and longer glycan strands than wild type. Importantly, midcell proteins are still recruited to sites of ΔCTL assembly. We propose that FtsZ regulates peptidoglycan metabolism through a CTL-dependent mechanism that extends beyond simple protein recruitment.

14 April 2022 in Nature Structural & Molecular Biology
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KZKeda Zhou
Keda Zhou
MGMagdalena Gebala
Magdalena Gebala
DWDustin Woods
Dustin Woods
KSKousik Sundararajan
Kousik Sundararajan
GEGarrett Edwards
Garrett Edwards
KLKarolin Luger
Karolin Luger
The histone variant CENP-A is the epigenetic determinant for the centromere, where it is interspersed with canonical H3 to form a specialized chromatin structure that nucleates the kinetochore. How nucleosomes at the centromere arrange into higher order structures is unknown. Here we demonstrate that the human CENP-A-interacting protein CENP-N promotes the stacking of CENP-A-containing mononucleosomes and nucleosomal arrays through a previously undefined interaction between the α6 helix of CENP-N with the DNA of a neighboring nucleosome. We describe the cryo-EM structures and biophysical characterization of such CENP-N-mediated nucleosome stacks and nucleosomal arrays and demonstrate that this interaction is responsible for the formation of densely packed chromatin at the centromere in the cell. Our results provide first evidence that CENP-A, together with CENP-N, promotes specific chromatin higher order structure at the centromere.

1 December 2017 in Journal of Biological Chemistry
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KSKousik Sundararajan
Kousik Sundararajan
EGErin D. Goley
Erin D. Goley
The bacterial tubulin FtsZ polymerizes to form a discontinuous ring that drives bacterial cell division by directing local cell wall synthesis. FtsZ comprises a polymerizing GTPase domain, an intrinsically disordered C-terminal linker (CTL), and a C-terminal conserved peptide (CTC). FtsZ protofilaments align circumferentially in the cell, with the CTC mediating attachment to membrane-associated division proteins. The assembly of FtsZ protofilaments into dynamic clusters is critical for cell division, but the interactions between protofilaments and regulatory mechanisms that mediate cluster assembly and dynamics are unknown. Here, we describe a role for the CTL of Caulobacter crescentus FtsZ as an intrinsic regulator of lateral interactions between protofilaments in vitro. FtsZ lacking its CTL (ΔCTL) shows a dramatically increased propensity to form long multifilament bundles compared with wild type (WT). ΔCTL also displays a reduced GTP hydrolysis rate compared with WT, but this altered activity does not account for bundle formation, as reducing protofilament turnover in WT is not sufficient to induce bundling. Surprisingly, binding of the membrane-anchoring protein FzlC disrupts ΔCTL bundling in a CTC-dependent manner. Moreover, the CTL affects the ability of the FtsZ curving protein FzlA to promote formation of helical bundles. We conclude that the CTL of FtsZ influences polymer structure and dynamics both through intrinsic effects on lateral interactions and turnover and by influencing extrinsic regulation of FtsZ by binding partners. Our characterization of CTL function provides a biochemical handle for understanding the relationship between FtsZ-ring structure and function in bacterial cytokinesis.

16 July 2018 in Molecular Microbiology
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KSKousik Sundararajan
Kousik Sundararajan
AVAnthony Vecchiarelli
Anthony Vecchiarelli
KMKiyoshi Mizuuchi
Kiyoshi Mizuuchi
EGErin D. Goley
Erin D. Goley