Carolin Huber

Mrs. Carolin Huber


Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 March 2021 in TrAC Trends in Analytical Chemistry
Verified
Journal Article
Open access
NCNoelia Caballero-Casero
Noelia Caballero-Casero
LBLidia Belova
Lidia Belova
PVPhilippe Vervliet
Philippe Vervliet
JAJean-Philippe Antignac
Jean-Philippe Antignac
ACArgelia Castaño
Argelia Castaño
ACAdrian Covaci
Adrian Covaci

1 July 2021 in Environment International
Verified
Journal Article
Open access
JMJeroen Meijer
Jeroen Meijer
MLMarja Lamoree
Marja Lamoree
THTimo Hamers
Timo Hamers
JAJean-Philippe Antignac
Jean-Philippe Antignac
SHSébastien Hutinet
Sébastien Hutinet
JVJelle Vlaanderen
Jelle Vlaanderen
Chemicals of Emerging Concern (CECs) include a very wide group of chemicals that are suspected to be responsible for adverse effects on health, but for which very limited information is available. Chromatographic techniques coupled with high-resolution mass spectrometry (HRMS) can be used for non-targeted screening and detection of CECs, by using comprehensive annotation databases. Establishing a database focused on the annotation of CECs in human samples will provide new insight into the distribution and extent of exposures to a wide range of CECs in humans. This study describes an approach for the aggregation and curation of an annotation database (CECscreen) for the identification of CECs in human biological samples. The approach consists of three main parts. First, CECs compound lists from various sources were aggregated and duplications and inorganic compounds were removed. Subsequently, the list was curated by standardization of structures to create "MS-ready" and "QSAR-ready" SMILES, as well as calculation of exact masses (monoisotopic and adducts) and molecular formulas. The second step included the simulation of Phase I metabolites. The third and final step included the calculation of QSAR predictions related to physicochemical properties, environmental fate, toxicity and Absorption, Distribution, Metabolism, Excretion (ADME) processes and the retrieval of information from the US EPA CompTox Chemicals Dashboard. All CECscreen database and property files are publicly available (DOI: https://doi.org/10.5281/zenodo.3956586). In total, 145,284 entries were aggregated from various CECs data sources. After elimination of duplicates and curation, the pipeline produced 70,397 unique "MS-ready" structures and 66,071 unique QSAR-ready structures, corresponding with 69,526 CAS numbers. Simulation of Phase I metabolites resulted in 306,279 unique metabolites. QSAR predictions could be performed for 64,684 of the QSAR-ready structures, whereas information was retrieved from the CompTox Chemicals Dashboard for 59,739 CAS numbers out of 69,526 inquiries. CECscreen is incorporated in the in silico fragmentation approach MetFrag. The CECscreen database can be used to prioritize annotation of CECs measured in non-targeted HRMS, facilitating the large-scale detection of CECs in human samples for exposome research. Large-scale detection of CECs can be further improved by integrating the present database with resources that contain CECs (metabolites) and meta-data measurements, further expansion towards in silico and experimental (e.g., MassBank) generation of MS/MS spectra, and development of bioinformatics approaches capable of using correlation patterns in the measured chemical features.

19 July 2024 in Journal of Hazardous Materials
Verified
Journal Article
Open access
FMFrank Menger
Frank Menger
MRMara Römerscheid
Mara Römerscheid
SLStefan Lips
Stefan Lips
OKOle Klein
Ole Klein
DNDeedar Nabi
Deedar Nabi
LHLars Hildebrandt
Lars Hildebrandt
Photodegradation of plastic consumer products is known to accelerate weathering and facilitate the release of chemicals and plastic particles into the aquatic environment. However, these processes are complex. In our presented pilot study, eight plastic consumer products were leached in distilled water under strong ultraviolet (UV) light simulating eight months of Central European climate and compared to their respective dark controls (DCs). The leachates and formed plastic particles were exploratorily characterized using a range of chemical analytical tools to describe degradation and leaching processes. These techniques covered (a) microplastic analysis, showing substantial liberation of plastic particles further increased under UV exposure, (b) non-targeted mass spectrometric characterization of the leachates, revealing several hundreds of chemical features with typically only minor agreement between the UV exposure and the corresponding DCs, (c) target analysis of 71 organic analytes, of which 15 could be detected in at least one sample, and (d) metal(loid) analysis, which revealed substantial release of toxic metal(loid)s further enhanced under UV exposure. A data comparison with the US-EPA's ToxVal and ToxCast databases showed that the detected metals and organic additives might pose substantial health and environmental concerns, requiring further study and comprehensive impact assessments.

5 August 2022 in Environment International
Verified
Journal Article
Open access
CHCarolin Huber
Carolin Huber
RNRosalie Nijssen
Rosalie Nijssen
HMHans Mol
Hans Mol
JAJean Philippe Antignac
Jean Philippe Antignac
MKMartin Krauss
Martin Krauss
ALArjen Lommen
Arjen Lommen
Within the Human Biomonitoring for Europe initiative (HBM4EU), a study to determine new biomarkers of exposure to pesticides and to assess exposure patterns was conducted. Human urine samples (N = 2,088) were collected from five European regions in two different seasons. The objective of the study was to identify pesticides and their metabolites in collected urine samples with a harmonized suspect screening approach based on liquid chromatography coupled to high resolution mass spectrometry (LC-HRMS) applied in five laboratories. A combined data processing workflow included comprehensive data reduction, correction of mass error and retention time (RT) drifts, isotopic pattern analysis, adduct and elemental composition annotation, finalized by a mining of the elemental compositions for possible annotations of pesticide metabolites. The obtained tentative annotations (n = 498) were used for acquiring representative data-dependent tandem mass spectra (MS2) and verified by spectral comparison to reference spectra generated from commercially available reference standards or produced through human liver S9 in vitro incubation experiments. 14 parent pesticides and 71 metabolites (including 16 glucuronide and 11 sulfate conjugates) were detected. Collectively these related to 46 unique pesticides. For the remaining tentative annotations either (i) no data-dependent MS2 spectra could be acquired, (ii) the spectral purity was too low for sufficient matching, or (iii) RTs indicated a wrong annotation, leaving potential for more pesticides and/or their metabolites being confirmed in further studies. Thus, the reported results are reflecting only a part of the possible pesticide exposure.

23 June 2021 in Analytical Chemistry
Verified
Journal Article
Open access
CHCarolin Huber
Carolin Huber
EMErik Müller
Erik Müller
TSTobias Schulze
Tobias Schulze
WBWerner Brack
Werner Brack
MKMartin Krauss
Martin Krauss
There is a current need to monitor human exposure to a large number of pesticides and other chemicals of emerging concern (CECs). This requires screening analysis with high confidence for these compounds and their metabolites in complex matrices, which is hampered by the fact that no reference standards are available for most metabolites. We address this challenge by a high-throughput workflow based on incubation of pesticides (or other CECs) with human liver S9, followed by solid-phase extraction, liquid chromatography–high-resolution mass spectrometry (LC–HRMS) analysis, and automated data processing to generate a database (retention time, precursor m/z, and MS2 spectral library) for the annotation in human samples. The metabolite prioritization consists of statistical comparisons and mass defect and m/z range filtering to obtain a subset of probable phase I metabolites, for which molecular formulas and likely metabolic transformation are retrieved. We tested the workflow on 22 pesticides, for which we could determine 91 metabolite molecular formulas which are only partly covered by the literature and/or predicted by in silico metabolization. Our workflow allows for an efficient generation of metabolite reference information, which can be used directly for annotating LC–HRMS data from human samples. A full structure elucidation of individual metabolites can be limited to those being actually present in human samples.

26 May 2022 in Analytical Chemistry
Verified
Journal Article
Closed access
CVChiara Maria Vitale
Chiara Maria Vitale
ALArjen Lommen
Arjen Lommen
CHCarolin Huber
Carolin Huber
KWKevin Wagner
Kevin Wagner
BMBorja Garlito Molina
Borja Garlito Molina
JAJean-Philippe Antignac
Jean-Philippe Antignac