Fragiskos N. Kolisis

Prof. Fragiskos N. Kolisis

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Research Focus & Metrics

Academic Career Length

32Years (1995-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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7 January 2016 in PLOS ONE
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DZDimitra Zarafeta
Dimitra Zarafeta
DKDimitrios Kissas
Dimitrios Kissas
CSChristopher Sayer
Christopher Sayer
SGSóley R Gudbergsdottir
Sóley R Gudbergsdottir
ELEfthymios Ladoukakis
Efthymios Ladoukakis
FKFragiskos N. Kolisis
Fragiskos N. Kolisis
With the ultimate goal of identifying robust cellulases for industrial biocatalytic conversions, we have isolated and characterized a new thermostable and very halotolerant GH5 cellulase. This new enzyme, termed CelDZ1, was identified by bioinformatic analysis from the genome of a polysaccharide-enrichment culture isolate, initiated from material collected from an Icelandic hot spring. Biochemical characterization of CelDZ1 revealed that it is a glycoside hydrolase with optimal activity at 70°C and pH 5.0 that exhibits good thermostability, high halotolerance at near-saturating salt concentrations, and resistance towards metal ions and other denaturing agents. X-ray crystallography of the new enzyme showed that CelDZ1 is the first reported cellulase structure that lacks the defined sugar-binding 2 subsite and revealed structural features which provide potential explanations of its biochemical characteristics.

19 December 2016 in Scientific Reports
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Journal Article
Open access
DZDimitra Zarafeta
Dimitra Zarafeta
DMDanai Moschidi
Danai Moschidi
ELEfthymios Ladoukakis
Efthymios Ladoukakis
SGSergey Gavrilov
Sergey Gavrilov
Evangelia ChrysinaEvangelia Chrysina
Evangelia Chrysina
FKFragiskos N. Kolisis
Fragiskos N. Kolisis
Biocatalysts exerting activity against ester bonds have a broad range of applications in modern biotechnology. Here, we have identified a new esterolytic enzyme by screening a metagenomic sample collected from a hot spring in Kamchatka, Russia. Biochemical characterization of the new esterase, termed EstDZ2, revealed that it is highly active against medium chain fatty acid esters at temperatures between 25 and 60 °C and at pH values 7–8. The new enzyme is moderately thermostable with a half-life of more than six hours at 60 °C, but exhibits exquisite stability against high concentrations of organic solvents. Phylogenetic analysis indicated that EstDZ2 is likely an Acetothermia enzyme that belongs to a new family of bacterial esterases, for which we propose the index XV. One distinctive feature of this new family, is the presence of a conserved GHSAG catalytic motif. Multiple sequence alignment, coupled with computational modelling of the three-dimensional structure of EstDZ2, revealed that the enzyme lacks the largest part of the “cap” domain, whose extended structure is characteristic for the closely related Family IV esterases. Thus, EstDZ2 appears to be distinct from known related esterolytic enzymes, both in terms of sequence characteristics, as well as in terms of three-dimensional structure.

1 January 2011 in Bioresource Technology
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SGStavros Gremos
Stavros Gremos
DZDimitra Zarafeta
Dimitra Zarafeta
DKDimitris Kekos
Dimitris Kekos
FKFragiskos N. Kolisis
Fragiskos N. Kolisis

24 April 2020 in Frontiers in Microbiology
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Journal Article
Open access
DZDimitra Zarafeta
Dimitra Zarafeta
AGAnastasia Galanopoulou
Anastasia Galanopoulou
MLMaria Evangelia Leni
Maria Evangelia Leni
SKStavroula I. Kaili
Stavroula I. Kaili
MCMagda S. Chegkazi
Magda S. Chegkazi
GSGeorgios Skretas
Georgios Skretas
Xylanolytic enzymes have a broad range of applications in industrial biotechnology as biocatalytic components of various processes and products, such as food additives, bakery products, coffee extraction, agricultural silage and functional foods. An increasing market demand has driven the growing interest for the discovery of xylanases with specific industrially relevant characteristics, such as stability at elevated temperatures and in the presence other denaturing factors, which will facilitate their incorporation into industrial processes. In this work, we report the discovery and biochemical characterization of a new thermostable GH10 xylanase, termed XynDZ5, exhibiting only 26% amino acid sequence identity to the closest characterized xylanolytic enzyme. This new enzyme was discovered in an Icelandic hot spring enrichment culture of a Thermoanaerobacterium species using a recently developed bioinformatic analysis platform. XynDZ5 was produced recombinantly in Escherichia coli, purified and characterized biochemically. This analysis revealed that it acts as an endo-1,4-β-xylanase that performs optimally at 65-75 oC and pH 7.5. The enzyme is capable of retaining high levels of catalytic efficiency after several hours of incubation at high temperatures, as well as in the presence of significant concentrations of a range of metal ions and denaturing agents. Interestingly, the XynDZ5 biochemical profile was found to be atypical, as it also exhibits significant exo-activity. Computational modelling of its three-dimensional structure predicted a (β/α)8 TIM barrel fold, which is very frequently encountered among family GH10 enzymes. This modelled structure has provided clues about structural features that may explain aspects of its catalytic performance. Our results suggest that XynDZ5 represents a promising new candidate biocatalyst appropriate for several high-temperature biotechnological applications in the pulp, paper, baking, animal-feed and biofuel industries.

1 August 1995 in Biotechnology Letters
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Paul ChristakopoulosPaul Christakopoulos
Paul Christakopoulos
DKD. Kekos
D. Kekos
FKFragiskos N. Kolisis
Fragiskos N. Kolisis
BMB. J. Macris
B. J. Macris

1 October 2016 in European Journal of Medicinal Chemistry
Verified
Journal Article
Closed access
MMMaria Michailidou
Maria Michailidou
VGVasiliki K Giannouli
Vasiliki K Giannouli
VKVasilios Kotsikoris
Vasilios Kotsikoris
OPOlga Papadodima
Olga Papadodima
GKGeorgia Kontogianni
Georgia Kontogianni
HLHeleni Loutrari
Heleni Loutrari