Beatriz Miranda-Zaragoza

Ms. Beatriz Miranda-Zaragoza

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Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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2 April 2020 in Biomolecules
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SRSantos Ramirez
Santos Ramirez
BMBeatriz Miranda-Zaragoza
Beatriz Miranda-Zaragoza
CAClaudia Rodriguez Almazan
Claudia Rodriguez Almazan
Actinoporins (APs) are a family of pore-forming toxins (PFTs) from sea anemones. These biomolecules exhibit the ability to exist as soluble monomers within an aqueous medium or as constitutively open oligomers in biological membranes. Through their conformational plasticity, actinoporins are considered good candidate molecules to be included for the rational design of molecular tools, such as immunotoxins directed against tumor cells and stochastic biosensors based on nanopores to analyze unique DNA or protein molecules. Additionally, the ability of these proteins to bind to sphingomyelin (SM) facilitates their use for the design of molecular probes to identify SM in the cells. The immunomodulatory activity of actinoporins in liposomal formulations for vaccine development has also been evaluated. In this review, we describe the potential of actinoporins for use in the development of molecular tools that could be used for possible medical and biotechnological applications.

Verified
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BMBeatriz Miranda-Zaragoza
Beatriz Miranda-Zaragoza
GHGuillermo Antonio Huerta-Miranda
Guillermo Antonio Huerta-Miranda
WGWendy Garcia
Wendy Garcia
EHElizabeth Hernández-Álvarez
Elizabeth Hernández-Álvarez
APAlejandro Solano - Peralta
Alejandro Solano - Peralta
CAClaudia Rodriguez Almazan
Claudia Rodriguez Almazan
Thermus thermophilus HB27 laccase (Tth-Lac) is a thermostable enzyme that contains a β-hairpin (Ala292-Gln307) covering the substrate entrance. We analyzed the role of this β-hairpin in the enzymatic activity of Tth-Lac through three β-hairpin mutants: two variants without the β-hairpin (C1Tth-Lac and C2Tth-Lac) and one with a partially modified β-hairpin (P1Tth-Lac). Enzymatic activity was assayed with different substrates with and without copper. C1Tth-Lac showed a higher dependency on copper, increasing its activity by 1600-fold for syringaldazine (SGZ). All mutants presented a higher activity than Tth-Lac with phenolic substrates in the presence of copper. The position of the signal associated with CuT2 also changed, as shown in EPR spectra. Elucidation of the crystal structure of P1Tth-Lac mutant (PDB: 9CPM) showed that the partial deletion of the β-hairpin did not significantly affect the overall tertiary structure compared to the wild-type (PDB: 2xu9) nor the coordination of the four internally bound Cu atoms. Higher B-factors of the residues downstream of the deletion indicate increased flexibility (Q307, G308, P309, S310) that were otherwise more ordered in the Tth-Lac structure. Redox potential experiments on platinum electrodes have shown that all proteins have high redox potential, a finding that could have significant implications in the field of protein research.

23 December 2023 in Marine Drugs
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Journal Article
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SRSantos Ramirez
Santos Ramirez
BMBeatriz Miranda-Zaragoza
Beatriz Miranda-Zaragoza
NSNuno Simoes
Nuno Simoes
RGRicardo González-Muñoz
Ricardo González-Muñoz
CAClaudia Rodriguez Almazan
Claudia Rodriguez Almazan
The bioprospecting of sea anemone tissues and secretions has revealed that they are natural libraries of polypeptides with diverse biological activities that can be utilized to develop of biotechnological tools with potential medical and industrial applications. This study conducted a proteomic analysis of crude venom extracts from Anthopleura dowii Verrill, 1869, and Lebrunia neglecta Duchassaing & Michelotti, 1860. The obtained data allowed us to identify 201 polypeptides, of which 39% were present in both extracts. Among the obtained sequences, hydrolase-type enzymes, oxidoreductases, transferases, heat shock proteins, adhesion proteins, and protease inhibitors, among others, were identified. Interaction analysis and functional annotation indicated that these proteins are primarily involved in endoplasmic reticulum metabolic processes such as carbon metabolism and protein processing. In addition, several proteins related to oxidative stress were identified, including superoxide dismutase, peroxiredoxins, thioredoxin, and glutathione oxidase. Our results provide novel information on the polypeptide composition of the crude venom extract from sea anemones, which can be utilized to develop molecules for therapeutic tools and industrial applications.

12 October 2026 in bioRxiv
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BMBeatriz Miranda-Zaragoza
Beatriz Miranda-Zaragoza
PGPaul Gaytán-Colín
Paul Gaytán-Colín
GHGuillermo Antonio Huerta-Miranda
Guillermo Antonio Huerta-Miranda
LRLeticia Ramírez-Silva
Leticia Ramírez-Silva
MMMargarita Miranda-Hernández
Margarita Miranda-Hernández
CAClaudia Rodriguez Almazan
Claudia Rodriguez Almazan
Laccases belong to the multicopper oxidase family (MCO). Compared with fungal lac-cases, bacterial laccases have high stability and activity under extreme pH and temperature conditions. Because of these characteristics, bacterial laccases have become highly impactful in industrial processes. In the present work, we engineered the Thermus thermophilus HB27 laccase (Tth-Lac) by directed evolution. The library had a size of 1.2 x10 5 colonies, and we screened mutants by malachite green decolorization on solid medium. The results showed that Q36H mutant exhibited higher catalytic activity than Tth-laccase (WT) at 90 °C. Both enzymes showed similar pH profiles, but the activity at 90 °C of Q36H mutant was X-fold higher than that of the wild-type enzyme. In contrast, the kinetic constants were similar for both enzymes. In the voltammetric responses, at 61.5 °C, the Q36H mutant showed increased current, and the T1 copper potential shifted by 100 mV relative to the tth-Lac. These results suggest that the Q36H mutation has high potential for industrial applications because replacing a glutamine (Q) with a histidine (H) at position 36 enhances the enzyme’s structural stability, allowing it to function efficiently under extreme temperature conditions.