Alireza Rafiei

Dr. Alireza Rafiei


Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2021 in Oxidative Medicine and Cellular Longevity
Verified
Journal Article
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FFFatemeh Faramarzi
Fatemeh Faramarzi
PZParisa Zafari
Parisa Zafari
MAMina Alimohammadi
Mina Alimohammadi
MMMohammadreza Moonesi
Mohammadreza Moonesi
ARAlireza Rafiei
Alireza Rafiei
Sander BekeschusSander Bekeschus
Sander Bekeschus
Despite recent advances in therapy, cancer still is a devastating and life‐threatening disease, motivating novel research lines in oncology. Cold physical plasma, a partially ionized gas, is a new modality in cancer research. Physical plasma produces various physicochemical factors, primarily reactive oxygen and nitrogen species (ROS/RNS), causing cancer cell death when supplied at supraphysiological concentrations. This review outlines the biomedical consequences of plasma treatment in experimental cancer therapy, including cell death modalities. It also summarizes current knowledge on intracellular signaling pathways triggered by plasma treatment to induce cancer cell death. Besides the inactivation of tumor cells, an equally important aspect is the inflammatory context in which cell death occurs to suppress or promote the responses of immune cells. This is mainly governed by the release of damage‐associated molecular patterns (DAMPs) to provoke immunogenic cancer cell death (ICD) that, in turn, activates cells of the innate immune system to promote adaptive antitumor immunity. The pivotal role of the immune system in cancer treatment, in general, is highlighted by many clinical trials and success stories on using checkpoint immunotherapy. Hence, the potential of plasma treatment to induce ICD in tumor cells to promote immunity targeting cancer lesions systemically is also discussed.

8 July 2020 in Biomolecules
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Journal Article
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MAMina Alimohammadi
Mina Alimohammadi
MGMonireh Golpour
Monireh Golpour
FSFarshad Sohbatzadeh
Farshad Sohbatzadeh
SHSeyedehniaz Hadavi
Seyedehniaz Hadavi
Sander BekeschusSander Bekeschus
Sander Bekeschus
ARAlireza Rafiei
Alireza Rafiei
Malignant melanoma is a devastating disease. Because of its aggressiveness, it also serves as a model tumor for investigating novel therapeutic avenues. In recent years, scientific evidence has shown that cold atmospheric plasma (CAP) might be a promising modality in cancer therapy. In this study, we aimed to evaluate the effect of CAP generated by an argon plasma jet alone or in combination with dacarbazine (DAC) on melanoma cells in vitro and in vivo. The effects of the CAP on inducing lipid peroxidation and nitric oxide production were higher in B16 melanoma cells in comparison to non-malignant L929 cells. Assays on cell growth, apoptosis, and expression of genes related to, e.g., autophagic processes, showed CAP to have a substantial impact in melanoma cells while there were only minoreffects in L929 cells. In vivo, both CAP monotherapy and combination with DAC significantly decreased tumor growth. These results suggest that CAP not only selectively induces cell death in melanoma but also holds promises in combination with chemotherapy that might lead to improved tumor control.

6 May 2019 in Journal of Cellular Physiology
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Journal Article
Closed access
PZParisa Zafari
Parisa Zafari
ARAlireza Rafiei
Alireza Rafiei
SESeyed-Alireza Esmaeili
Seyed-Alireza Esmaeili
MMMohammadreza Moonesi
Mohammadreza Moonesi
MTMahdi Taghadosi
Mahdi Taghadosi

1 September 2011 in Journal of Clinical Microbiology
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Journal Article
Closed access
AAAmin Talebi Bezmin Abadi
Amin Talebi Bezmin Abadi
ARAlireza Rafiei
Alireza Rafiei
AAAbolghasem Ajami
Abolghasem Ajami
VHVahid Hosseini
Vahid Hosseini
TTTarang Taghvaei
Tarang Taghvaei
DMD. Scott Merrell
D. Scott Merrell
While several distinct virulence factors of Helicobacter pylori have been shown to be associated with different clinical outcomes, there is still much to learn about the role of different bacterial factors in gastric carcinogenesis. This study looked at the distribution of the cagA , homA , and homB genes in strains isolated from patients suffering from gastroduodenal diseases in Iran and assessed if there was any association between disease state and the presence of the aforementioned virulence factors. Genomic DNA from 138 H. pylori strains was isolated and genotyped via PCR. Strains were obtained from dyspeptic patients (35 from gastritis patients, 62 from peptic ulcer patients, and 41 from gastric cancer patients) at the Teaching Touba Clinic and Imam Hospital of the Mazandaran University of Medical Sciences in Sari, Iran. The overall prevalence rates of cagA , homA , and homB were 58%, 54%, and 43%, respectively. Stratification of patients showed a significant difference in the prevalence of H. pylori virulence genes across the disease states. The frequency of homB was statistically significantly higher in gastric cancer patients (78%) than in patients suffering from peptic ulcers (20%) or gastritis (43%) ( P < 0.0001). The presence of homB was also associated with the presence of cagA ( r = 0.243). These data suggest that in this population the presence of homB may be a predictor of more virulent strains of H. pylori and influence the severity of disease manifestation.

18 February 2019 in Infectious Diseases
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Journal Article
Closed access
OAOmolbanin Amjadi
Omolbanin Amjadi
ARAlireza Rafiei
Alireza Rafiei
MMMasoud Mardani
Masoud Mardani
PZParisa Zafari
Parisa Zafari
AZAhmadreza Zarifian
Ahmadreza Zarifian
Brucellosis, caused by the intracellular pathogens Brucella, is one of the major zoonotic infections. Considering the economic burden, its prevalence has been a health concern especially in endemic regions. Brucella is able to survive and replicate within host cells by expressing different virulence factors and using various strategies to avoid the host’s immune response. This leads to progression of the disease from an acute phase to chronic brucellosis. Exploration of genetic variations has confirmed the expected influence of gene polymorphisms on susceptibility and resistance to brucellosis of humans. Since there is no approved human vaccine and treatment is uncertain with risk of relapse, it is important to increase knowledge about pathogenesis, diagnosis and treatment of brucellosis in order to manage and control this infection, especially in endemic regions.

1 August 2020 in Infection and Drug Resistance
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Journal Article
Open access
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ZYZahra Yazdani
Zahra Yazdani
ARAlireza Rafiei
Alireza Rafiei
MYMohammadreza Yazdani
Mohammadreza Yazdani
RVReza Valadan
Reza Valadan
Background: To date, no specific vaccine or drug has been proven to be effective against SARS-CoV-2 infection. Therefore, we implemented an immunoinformatic approach to design an efficient multi-epitopes vaccine against SARS-CoV-2. Results: The designed-vaccine construct consists of several immunodominant epitopes from structural proteins of spike, nucleocapsid, membrane, and envelope. These peptides promote cellular and humoral immunity and interferon-gamma responses. Also, these epitopes have a high antigenic capacity and are not likely to cause allergies. To enhance the vaccine immunogenicity, we used three potent adjuvants: Flagellin of Salmonella enterica subsp. enterica serovar Dublin, a driven peptide from high mobility group box 1 as HP-91, and human beta-defensin 3 protein. The physicochemical and immunological properties of the vaccine structure were evaluated. The tertiary structure of the vaccine protein was predicted and refined by Phyre2 and Galaxi refine and validated using RAMPAGE and ERRAT. Results of ElliPro showed 246 sresidues from vaccine might be conformational B-cell epitopes. Docking of the vaccine with toll-like receptors (TLR) 3, 5, 8, and angiotensin-converting enzyme 2 approved an appropriate interaction between the vaccine and receptors. Prediction of mRNA secondary structure and in silico cloning demonstrated that the vaccine can be efficiently expressed in Escherichia coli. Conclusion: Our results demonstrated that the multi-epitope vaccine might be potentially antigenic and induce humoral and cellular immune responses against SARS-CoV-2. This vaccine can interact appropriately with the TLR3, 5, and 8. Also, it has a high-quality structure and suitable characteristics such as high stability and potential for expression in Escherichia coli .