Hafiz Muhammad Kamran

Mr. Hafiz Muhammad Kamran


Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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24 May 2020 in Plants
Verified
Journal Article
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HKHafiz Muhammad Kamran
Hafiz Muhammad Kamran
SHSyed Bilal Hussain
Syed Bilal Hussain
SJShang Junzhong
Shang Junzhong
LXLin Xiang
Lin Xiang
LCLongqing Chen
Longqing Chen
Geranyl diphosphate synthase (GPPS) is a plastid localized enzyme that catalyzes the biosynthesis of Geranyl diphosphate (GPP), which is a universal precursor of monoterpenes. Wintersweet (Chimonanthus praecox L.), a famous deciduous flowering shrub with a strong floral scent character, could have GPPS-like homologs that are involved in monoterpenes biosynthesis, but it remains unclear. In the present study, five full-length GPPS and geranylgeranyl diphosphate synthases (GGPPS) genes were identified in the wintersweet transcriptome database. The isolated cDNAs showed high protein sequence similarity with the other plants GPPS and GGPPS. The phylogenetic analysis further classified these cDNAs into four distinct clades, representing heterodimeric GPPS small subunits (SSU1 and SSU2), homodimeric GPPS, and GGPPS. Analysis of temporal expression revealed that all genes have the highest transcript level at the full-open flower stage. From tissue-specific expression analysis, CpGPPS.SSU1 and CpGGPPS1 were predominantly expressed in petal and flower, whereas CpGPPS.SSU2, GPPS, and GGPPS2 showed a constitutive expression. Additionally, the subcellular localization assay identified the chloroplast localization of SSUs and GGPPSs proteins, and the yeast two-hybrid assay showed that both CpGPPS.SSU1 and CpGPPS.SSU2 can interact with the GGPPS proteins. Taken together, these preliminary results suggest that the heterodimeric GPPS can regulate floral scent biosynthesis in wintersweet flower.

Verified
Journal Article
Open access
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HKHafiz Muhammad Kamran
Hafiz Muhammad Kamran
FXFu Xuemei
Fu Xuemei
HWHuabo Wang
Huabo Wang
YNYang Nan
Yang Nan
LCLongqing Chen
Longqing Chen
Wintersweet (Chimonanthus praecox (L.) Link, Calycanthaceae) is an esteemed ornamental flowering shrub known for its distinct blooming period in winter, vibrant color petals, and captivating floral fragrance. Basic helix-loop-helix (bHLH) transcription factors (TFs) play pivotal roles as key regulators in secondary metabolites biosynthesis, growth, and development in plants. However, the systematic analysis of the bHLH family members and their role in the regulation of floral traits in Wintersweet remains insufficiently understood. To bridge this knowledge gap, we conducted a comprehensive genome-wide analysis of the C. praecox bHLH (CpbHLH) gene family, identifying a total of 131 CpbHLH genes across 11 chromosomes. Phylogenetic analysis classified these CpbHLH genes into 23 subfamilies, wherein most members within the same subfamily exhibited analogous intron/exon patterns and motif composition. Moreover, the expansion of the CpbHLH gene family was primarily driven by segmental duplication, with duplicated gene pairs experiencing purifying selection during evolution. Transcriptomic analysis revealed diverse expression patterns of CpbHLH genes in various tissues and distinct stages of Wintersweet flower development, thereby suggesting their involvement in a diverse array of physiological processes. Furthermore, yeast 2-hybrid assay demonstrated interaction between CpbHLH25 and CpbHLH59 (regulators of floral scent and color) as well as with CpbHLH112 and CpMYB2, suggesting potential coordinately regulation of secondary metabolites biosynthesis in Wintersweet flowers. Collectively, our comprehensive analysis provides valuable insights into the structural attributes, evolutionary dynamics, and expression profiles of the CpbHLH gene family, laying a solid foundation for further explorations of the multifaceted physiological and molecular roles of bHLH TFs in Wintersweet.

18 April 2023 in Agriculture
Verified
Journal Article
Open access
PDF file
FXFu Xuemei
Fu Xuemei
YNYang Nan
Yang Nan
YDYongqin Du
Yongqin Du
HKHafiz Muhammad Kamran
Hafiz Muhammad Kamran
HWHuabo Wang
Huabo Wang
LCLongqing Chen
Longqing Chen
Terpene synthase (TPS) plays a key role in the biosynthesis of terpenoids, which are the most important components of the volatile compounds of wintersweet (Chimonanthus praecox). In this study, 52 CpTPS genes were found in wintersweet which were divided into 5 subfamilies. We identified 146 SSRs in the CpTPS genes, and obtained 33 pairs of SSR primers with good polymorphism through amplification in 6 wintersweet samples. Then, these primers were amplified in 69 samples from China’s main wintersweet production areas. Through structural analysis, 69 samples were divided into 2 clusters, and were divided into 4 groups in a genetic cluster analysis, of which SH-33 and SW were separate groups. Through AMOVA analysis, it was found that the variation mainly occurred in the population, and that the gene flow between populations was Nm > 1, so it might lead to population differentiation. In other words, these findings provided useful information for the biosynthesis of terpenoids, the construction of a genetic linkage map, the detection of quantitative trait loci, marker-assisted selection and other aspects of wintersweet.