Min Xu

Prof. Min Xu

orcid

Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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19 March 2025 in Medical Image Analysis
Verified
Journal Article
Open access
JWJunde Wu
Junde Wu
ZWZiyue WANG
Ziyue WANG
MHMingxuan Hong
Mingxuan Hong
WJWei Ji
Wei Ji
HFHuazhu Fu
Huazhu Fu
YJYueming Jin
Yueming Jin
The Segment Anything Model (SAM) has recently gained popularity in the field of image segmentation due to its impressive capabilities in various segmentation tasks and its prompt-based interface. However, recent studies and individual experiments have shown that SAM underperforms in medical image segmentation due to the lack of medical-specific knowledge. This raises the question of how to enhance SAM's segmentation capability for medical images. We propose the Medical SAM Adapter (Med-SA), which is one of the first methods to integrate SAM into medical image segmentation. Med-SA uses a light yet effective adaptation technique instead of fine-tuning the SAM model, incorporating domain-specific medical knowledge into the segmentation model. We also propose Space-Depth Transpose (SD-Trans) to adapt 2D SAM to 3D medical images and Hyper-Prompting Adapter (HyP-Adpt) to achieve prompt-conditioned adaptation. Comprehensive evaluation experiments on 17 medical image segmentation tasks across various modalities demonstrate the superior performance of Med-SA while updating only 2% of the SAM parameters (13M). Our code is released at https://github.com/KidsWithTokens/Medical-SAM-Adapter.

24 March 2024 in Proceedings of the AAAI Conference on Artificial Intelligence
Verified
Journal Article
Open access
PDF file
JWJunde Wu
Junde Wu
WJWei Ji
Wei Ji
HFHuazhu Fu
Huazhu Fu
MXMin Xu
Min Xu
YJYueming Jin
Yueming Jin
Yanwu XuYanwu Xu
Yanwu Xu
The Diffusion Probabilistic Model (DPM) has recently gained popularity in the field of computer vision, thanks to its image generation applications, such as Imagen, Latent Diffusion Models, and Stable Diffusion, which have demonstrated impressive capabilities and sparked much discussion within the community. Recent investigations have further unveiled the utility of DPM in the domain of medical image analysis, as underscored by the commendable performance exhibited by the medical image segmentation model across various tasks. Although these models were originally underpinned by a UNet architecture, there exists a potential avenue for enhancing their performance through the integration of vision transformer mechanisms. However, we discovered that simply combining these two models resulted in subpar performance. To effectively integrate these two cutting-edge techniques for the Medical image segmentation, we propose a novel Transformer-based Diffusion framework, called MedSegDiff-V2. We verify its effectiveness on 20 medical image segmentation tasks with different image modalities. Through comprehensive evaluation, our approach demonstrates superiority over prior state-of-the-art (SOTA) methodologies. Code is released at https://github.com/KidsWithTokens/MedSegDiff.

17 September 2019 in Energy & Environmental Materials
Verified
Journal Article
Open access
PDF file
FLFan Li
Fan Li
XPXiaoqi Peng
Xiaoqi Peng
ZWZuo Wang
Zuo Wang
YZYi Zhou
Yi Zhou
YWYuxia Wu
Yuxia Wu
MXMin Xu
Min Xu
Photovoltaic (PV) technologies have attracted great interest due to their capability of generating electricity directly from sunlight. Machine learning (ML) is a technique for computer to learn how to perform a specific task using known data. It can be used in many areas and has become a hot research topic recently due to the rapid accumulation of data and advancement of computer hardware. The application of ML techniques in the design and fabrication of solar cells started slowly but has recently gained tremendous momentum. An exhaustive compilation of the literatures indicates that all the major aspects in the research and development of solar cells can be effectively assisted by ML techniques. If combined with other tools and fed with additional theoretical and experimental data, more accurate and robust results can be achieved from ML techniques. The aspects can be grouped into four categories: prediction of material properties, optimization of device structures, optimization of fabrication processes, and reconstruction of measurement data. A statistical analysis of the literatures shows that artificial neural network (ANN) and genetic algorithm (GA) are the two most applied ML techniques and the topics in the optimization of device structures and optimization of fabrication processes are more popular. This article can be used as a reference by all PV researchers who are interested in ML techniques.

1 May 2019 in Computers in Biology and Medicine
Verified
Journal Article
Closed access
WWWeikang Wang
Weikang Wang
DTDavid A. Taft
David A. Taft
YCYi-Jiun Chen
Yi-Jiun Chen
JZJingyu Zhang
Jingyu Zhang
CWCallen T. Wallace
Callen T. Wallace
JXJianhua Xing
Jianhua Xing

7 April 2023 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Open access
XZXiangrui Zeng
Xiangrui Zeng
AKAnson Kahng
Anson Kahng
LXLiang Xue
Liang Xue
JMJulia Mahamid
Julia Mahamid
YCYi-Wei Chang
Yi-Wei Chang
MXMin Xu
Min Xu
Cryoelectron tomography directly visualizes heterogeneous macromolecular structures in their native and complex cellular environments. However, existing computer-assisted structure sorting approaches are low throughput or inherently limited due to their dependency on available templates and manual labels. Here, we introduce a high-throughput template-and-label-free deep learning approach, Deep Iterative Subtomogram Clustering Approach (DISCA), that automatically detects subsets of homogeneous structures by learning and modeling 3D structural features and their distributions. Evaluation on five experimental cryo-ET datasets shows that an unsupervised deep learning based method can detect diverse structures with a wide range of molecular sizes. This unsupervised detection paves the way for systematic unbiased recognition of macromolecular complexes in situ.

1 April 2019 in Structure
Verified
Journal Article
Closed access
MXMin Xu
Min Xu
JSJitin Singla
Jitin Singla
ETElitza I. Tocheva
Elitza I. Tocheva
YCYi-Wei Chang
Yi-Wei Chang
RSRaymond C. Stevens
Raymond C. Stevens
FAFrank Alber
Frank Alber