Masato Kanemaki

Dr. Masato Kanemaki

orcid

Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 November 2009 in Nature Methods
Verified
Journal Article
Closed access
KNKohei Nishimura
Kohei Nishimura
TFTatsuo Fukagawa
Tatsuo Fukagawa
HTHaruhiko Takisawa
Haruhiko Takisawa
TKTatsuo Kakimoto
Tatsuo Kakimoto
MKMasato Kanemaki
Masato Kanemaki

9 February 2018 in Science
Verified
Journal Article
Closed access
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JGJohan Gibcus
Johan Gibcus
KSKuniko Samejima
Kuniko Samejima
AGAnton Goloborodko
Anton Goloborodko
ISItaru Samejima
Itaru Samejima
NNNatalia Naumova
Natalia Naumova
JDJob Dekker
Job Dekker
Tracking mitotic chromosome formation: How cells pack DNA into fully compact, rod-shaped chromosomes during mitosis has fascinated cell biologists for more than a century. Gibcuset al.delineated the conformational transition trajectory from interphase chromatin to mitotic chromosomes minute by minute during the cell cycle. The mitotic chromosome is organized in a spiral staircase architecture in which chromatin loops emanate radially from a centrally located helical scaffold. The molecular machines condensin I and II play distinct roles in these processes: Condensin II is essential for helical winding, whereas condensin I modulates the organization within each helical turn.Science, this issue p.eaao6135

1 April 2016 in Cell Reports
Verified
Journal Article
Open access
TNToyoaki Natsume
Toyoaki Natsume
TKTomomi Kiyomitsu
Tomomi Kiyomitsu
YSYumiko Saga
Yumiko Saga
MKMasato Kanemaki
Masato Kanemaki
Studying the role of essential proteins is dependent upon a method for rapid inactivation, in order to study the immediate phenotypic consequences. Auxin-inducible degron (AID) technology allows rapid depletion of proteins in animal cells and fungi, but its application to human cells has been limited by the difficulties of tagging endogenous proteins. We have developed a simple and scalable CRISPR/Cas-based method to tag endogenous proteins in human HCT116 and mouse embryonic stem (ES) cells by using donor constructs that harbor synthetic short homology arms. Using a combination of AID tagging with CRISPR/Cas, we have generated conditional alleles of essential nuclear and cytoplasmic proteins in HCT116 cells, which can then be depleted very rapidly after the addition of auxin to the culture medium. This approach should greatly facilitate the functional analysis of essential proteins, particularly those of previously unknown function.

16 May 2017 in Nature Communications
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Journal Article
Open access
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ATAkiko Takahashi
Akiko Takahashi
RORyo Okada
Ryo Okada
KNKoji Nagao
Koji Nagao
YKYuka Kawamata
Yuka Kawamata
AHAki Hanyu
Aki Hanyu
EHEiji Hara
Eiji Hara
Emerging evidence is revealing that exosomes contribute to many aspects of physiology and disease through intercellular communication. However, the biological roles of exosome secretion in exosome-secreting cells have remained largely unexplored. Here we show that exosome secretion plays a crucial role in maintaining cellular homeostasis in exosome-secreting cells. The inhibition of exosome secretion results in the accumulation of nuclear DNA in the cytoplasm, thereby causing the activation of cytoplasmic DNA sensing machinery. This event provokes the innate immune response, leading to reactive oxygen species (ROS)-dependent DNA damage response and thus induce senescence-like cell-cycle arrest or apoptosis in normal human cells. These results, in conjunction with observations that exosomes contain various lengths of chromosomal DNA fragments, indicate that exosome secretion maintains cellular homeostasis by removing harmful cytoplasmic DNA from cells. Together, these findings enhance our understanding of exosome biology, and provide valuable new insights into the control of cellular homeostasis.

11 November 2020 in Nature Communications
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Journal Article
Open access
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AYAisha Yesbolatova
Aisha Yesbolatova
YSYuichiro Saito
Yuichiro Saito
NKNaomi Kitamoto
Naomi Kitamoto
HMHatsune Makino-Itou
Hatsune Makino-Itou
RARieko Ajima
Rieko Ajima
MKMasato Kanemaki
Masato Kanemaki
Protein knockdown using the auxin-inducible degron (AID) technology is useful to study protein function in living cells because it induces rapid depletion, which makes it possible to observe an immediate phenotype. However, the current AID system has two major drawbacks: leaky degradation and the requirement for a high dose of auxin. These negative features make it difficult to control precisely the expression level of a protein of interest in living cells and to apply this method to mice. Here, we overcome these problems by taking advantage of a bump-and-hole approach to establish the AID version 2 (AID2) system. AID2, which employs an OsTIR1(F74G) mutant and a ligand, 5-Ph-IAA, shows no detectable leaky degradation, requires a 670-times lower ligand concentration, and achieves even quicker degradation than the conventional AID. We demonstrate successful generation of human cell mutants for genes that were previously difficult to deal with, and show that AID2 achieves rapid target depletion not only in yeast and mammalian cells, but also in mice.

1 July 2017 in Molecular Cell
Verified
Journal Article
Closed access
TNTadasu Nozaki
Tadasu Nozaki
RIRyosuke Imai
Ryosuke Imai
MTMai Tanbo
Mai Tanbo
RNRyosuke Nagashima
Ryosuke Nagashima
STSachiko Tamura
Sachiko Tamura
KMKazuhiro Maeshima
Kazuhiro Maeshima