Andre Bachmann

Andre Bachmann


Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
1 April 2008 in Nature
Verified
Journal Article
Closed access
MGMichael Groll
Michael Groll
BSBarbara Schellenberg
Barbara Schellenberg
ABAndre Bachmann
Andre Bachmann
CACrystal R. Archer
Crystal R. Archer
RHRobert Huber
Robert Huber
RDRobert Dudler
Robert Dudler

1 November 2018 in Journal of Biological Chemistry
Verified
Journal Article
Open access
PDF file
ABAndré S. Bachmann
André S. Bachmann
Dirk GeertsDirk Geerts
Dirk Geerts
This paper is in recognition of the 100th birthday of Dr. Herbert Tabor, a true pioneer in the polyamine field for over 70 years, who served as the editor-in-chief of the Journal for Biological Chemistry from 1971 to 2010. We review current knowledge of MYC proteins (c-MYC, MYCN, and MYCL) and focus on ornithine decarboxylase 1 (ODC1), an important bona fide gene target of MYC and encoding the sentinel, rate-limiting enzyme in polyamine biosynthesis. Although notable advances have been made in designing inhibitors against the “undruggable” MYC, its downstream targets and pathways are currently the main avenue for therapeutic anticancer interventions. To this end, the MYC–ODC axis presents an attractive target for managing cancers such as neuroblastoma, a pediatric cancer in which MYCN gene amplification correlates with poor prognosis and high-risk disease. ODC and polyamine levels are often up-regulated and contribute to tumor hyperproliferation, especially of MYC-driven cancers. We therefore had proposed to repurpose α-difluoromethylornithine (DFMO), an FDA-approved, orally available ODC inhibitor, for management of neuroblastoma, and this intervention is now being pursued in several clinical trials. We discuss the regulation of ODC and polyamines, which besides their well-known interactions with DNA and tRNA/rRNA, are involved in regulating RNA transcription and translation, ribosome function, proteasomal degradation, the circadian clock, and immunity, events that are controlled by MYC proteins.

27 May 2015 in PLOS ONE
Verified
Journal Article
Open access
PDF file
Giselle L. Saulnier-ShollerGiselle L. Saulnier-Sholler
Giselle L. Saulnier-Sholler
EGEugene W. Gerner
Eugene W. Gerner
GBGenevieve Bergendahl
Genevieve Bergendahl
RMRobert B. MacArthur
Robert B. MacArthur
AVAlyssa VanderWerff
Alyssa VanderWerff
ABAndré S. Bachmann
André S. Bachmann
Neuroblastoma (NB) is the most common cancer in infancy and most frequent cause of death from extracranial solid tumors in children. Ornithine decarboxylase (ODC) expression is an independent indicator of poor prognosis in NB patients. This study investigated safety, response, pharmacokinetics, genetic and metabolic factors associated with ODC in a clinical trial of the ODC inhibitor difluoromethylornithine (DFMO) ± etoposide for patients with relapsed or refractory NB. Twenty-one patients participated in a phase I study of daily oral DFMO alone for three weeks, followed by additional three-week cycles of DFMO plus daily oral etoposide. No dose limiting toxicities (DLTs) were identified in patients taking doses of DFMO between 500-1500 mg/m2 orally twice a day. DFMO pharmacokinetics, single nucleotide polymorphisms (SNPs) in the ODC gene and urinary levels of substrates for the tissue polyamine exporter were measured. Urinary polyamine levels varied among patients at baseline. Patients with the minor T-allele at rs2302616 of the ODC gene had higher baseline levels (p=0.02) of, and larger decreases in, total urinary polyamines during the first cycle of DFMO therapy (p=0.003) and had median progression free survival (PFS) that was over three times longer, compared to patients with the major G allele at this locus although this last result was not statistically significant (p=0.07). Six of 18 evaluable patients were progression free during the trial period with three patients continuing progression free at 663, 1559 and 1573 days after initiating treatment. Median progression-free survival was less among patients having increased urinary polyamines, especially diacetylspermine, although this result was not statistically significant (p=0.056). DFMO doses of 500-1500mg/m2/day are safe and well tolerated in children with relapsed NB. Children with the minor T allele at rs2302616 of the ODC gene with relapsed or refractory NB had higher levels of urinary polyamine markers and responded better to therapy containing DFMO, compared to those with the major G allele at this locus. These findings suggest that this patient subset may display dependence on polyamines and be uniquely susceptible to therapies targeting this pathway. Clinicaltrials.gov NCT#01059071

20 June 2005 in Oncogene
Verified
Journal Article
Closed access
CWChristopher J Wallick
Christopher J Wallick
IGIvonne Gamper
Ivonne Gamper
MTMike Thorne
Mike Thorne
DFDavid J Feith
David J Feith
KTKelsie Y Takasaki
Kelsie Y Takasaki
ABAndre Bachmann
Andre Bachmann

1 December 2008 in Cancer Research
Verified
Journal Article
Open access
PDF file
DKDana-Lynn T. Koomoa
Dana-Lynn T. Koomoa
LYLisette P. Yco
Lisette P. Yco
TBTamas Borsics
Tamas Borsics
CWChristopher J. Wallick
Christopher J. Wallick
ABAndre Bachmann
Andre Bachmann
Ornithine decarboxylase (ODC) is a key enzyme in mammalian polyamine biosynthesis that is up-regulated in various types of cancer. We previously showed that treating human neuroblastoma (NB) cells with the ODC inhibitor α-difluoromethylornithine (DFMO) depleted polyamine pools and induced G1 cell cycle arrest without causing apoptosis. However, the precise mechanism by which DFMO provokes these changes in NB cells remained unknown. Therefore, we further examined the effects of DFMO, alone and in combination with phosphatidylinositol 3-kinase (PI3K) inhibitor LY294002 or Akt/protein kinase B (PKB) inhibitor IV, on the regulation of cell survival and cell cycle–associated pathways in LAN-1 NB cells. In the present study, we found that the inhibition of ODC by DFMO promotes cell survival by inducing the phosphorylation of Akt/PKB at residue Ser473 and glycogen synthase kinase-3β at Ser9. Intriguingly, DFMO also induced the phosphorylation of p27Kip1 at residues Ser10 (nuclear export) and Thr198 (protein stabilization) but not Thr187 (proteasomal degradation). The combined results from this study provide evidence for a direct cross-talk between ODC-dependent metabolic processes and well-established cell signaling pathways that are activated during NB tumorigenesis. The data suggest that inhibition of ODC by DFMO induces two opposing pathways in NB: one promoting cell survival by activating Akt/PKB via the PI3K/Akt pathway and one inducing p27Kip1/retinoblastoma-coupled G1 cell cycle arrest via a mechanism that regulates the phosphorylation and stabilization of p27Kip1. This study presents new information that may explain the moderate efficacy of DFMO monotherapy in clinical trials and reveals potential new targets for DFMO-based combination therapies for NB treatment. [Cancer Res 2008;68(23):9825–31]

3 December 2009 in International Journal of Cancer
Verified
Journal Article
Open access
PDF file
Dirk GeertsDirk Geerts
Dirk Geerts
JKJan Koster
Jan Koster
DADavid Albert
David Albert
DKDana‐Lynn T. Koomoa
Dana‐Lynn T. Koomoa
DFDavid J. Feith
David J. Feith
ABAndre Bachmann
Andre Bachmann
High polyamine (PA) levels and ornithine decarboxylase (ODC) overexpression are well‐known phenomena in many aggressive cancer types. We analyzed the expression of ODC and ODC‐activity regulating genes antizymes 1‐3 (OAZ1‐3) and antizyme inhibitors 1‐2 (AZ‐IN1‐2) in human neuroblastoma (NB) tumors and correlated these with genetic and clinical features of NB. Since ODC is a known target gene of MYCN, the correlation between ODC and MYCN was of special interest. Data were obtained from Affymetrix micro‐array analysis of 88 NB tumor samples. In addition, mRNA expression levels of ODC, OAZ2 and MYCN in a MYCN‐inducible NB cell line were determined by quantitative real‐time reverse‐transcriptase polymerase chain reaction (RT‐PCR). ODC mRNA expression in NB tumors was significantly predictive of decreased overall survival probability and correlated with several unfavorable clinical NB characteristics (all p < 0.005). Interestingly, high ODC mRNA expression also showed significant correlation with poor survival prognosis in Kaplan‐Meier analyses stratified for patients without MYCN amplification, suggesting an additional role for ODC independent of MYCN. Conversely, high OAZ2 mRNA expression correlated with increased survival and with several favorable clinical NB characteristics (all p < 0.003). In addition, we provide first evidence of a role for MYCN‐associated transcription factors MAD2 and MAD7 in ODC regulation. In NB cell cultures, ectopic overexpression of MYCN altered ODC but not OAZ2 mRNA levels. In conclusion, these data suggest that elevated ODC and low OAZ2 mRNA expression levels correlate with several unfavorable genetic and clinical features in NB, offering new insights into PA pathways and PA metabolism‐targeting therapy in NB.