The use of spectral imaging within the plant phenotyping and breeding community has been increasing due its utility as a non-invasive diagnostic tool. However, there is a lack of imaging systems targeted specifically at plant science duties, resulting in low precision for canopy-scale measurements. This study trials a prototype multispectral system designed specifically for plant studies and looks at its use as an early detection system for visually asymptomatic disease phases, in this case Pyrenopeziza brassicae in Brassica napus. The analysis takes advantage of machine learning in the form of feature selection and novelty detection to facilitate the classification. An initial study into recording the morphology of the samples is also included to allow for further improvement to the system performance. The proposed method was able to detect light leaf spot infection with 92% accuracy when imaging entire oilseed rape plants from above, 12 days after inoculation and 13 days before the appearance of visible symptoms. False colour mapping of spectral vegetation indices was used to quantify disease severity and its distribution within the plant canopy. In addition, the structure of the plant was recorded using photometric stereo, with the output influencing regions used for diagnosis. The shape of the plants was also recorded using photometric stereo, which allowed for reconstruction of the leaf angle and surface texture, although further work is needed to improve the fidelity due to uneven lighting distributions, to allow for reflectance compensation. The ability of active multispectral imaging has been demonstrated along with the improvement in time taken to detect light leaf spot at a high accuracy. The importance of capturing structural information is outlined, with its effect on reflectance and thus classification illustrated. The system could be used in plant breeding to enhance the selection of resistant cultivars, with its early and quantitative capability.

• 3D and 2D vision plant and crop analysis with advanced functionality, is described. • Challenges for robust and reliable machine vision in the field, are considered. • Photometric stereo enables recovery of plant textures at high-resolution. • Widespread uptake of the proposed methods is facilitated by their low cost.

This paper presents a new database suitable for both 2-D and 3-D face recognition based on photometric stereo (PS): the Photoface database. The database was collected using a custom-made four-source PS device designed to enable data capture with minimal interaction necessary from the subjects. The device, which automatically detects the presence of a subject using ultrasound, was placed at the entrance to a busy workplace and captured 1839 sessions of face images with natural pose and expression. This meant that the acquired data is more realistic for everyday use than existing databases and is, therefore, an invaluable test bed for state-of-the-art recognition algorithms. The paper also presents experiments of various face recognition and verification algorithms using the albedo, surface normals, and recovered depth maps. Finally, we have conducted experiments in order to demonstrate how different methods in the pipeline of PS (i.e., normal field computation and depth map reconstruction) affect recognition and verification performance. These experiments help to 1) demonstrate the usefulness of PS, and our device in particular, for minimal-interaction face recognition, and 2) highlight the optimal reconstruction and recognition algorithms for use with natural-expression PS data. The database can be downloaded from http://www.uwe.ac.uk/research/Photoface.

Animal welfare is not only an ethically important consideration in good animal husbandry but can also have a significant effect on an animal’s productivity. The aim of this paper was to show that a reduction in animal welfare, in the form of increased stress, can be identified in pigs from frontal images of the animals. We trained a convolutional neural network (CNN) using a leave-one-out design and showed that it is able to discriminate between stressed and unstressed pigs with an accuracy of >90% in unseen animals. Grad-CAM was used to identify the animal regions used, and these supported those used in manual assessments such as the Pig Grimace Scale. This innovative work paves the way for further work examining both positive and negative welfare states with the aim of developing an automated system that can be used in precision livestock farming to improve animal welfare.