High tumor mutational burden (TMB), which represents genomic instability, has the potential to induce neoantigen production and further immunogenicity improvement.
1 Recent studies have confirmed that TMB measured by whole-exome sequencing (WES) or a next-generation sequencing (NGS) cancer gene panel (CGP) can serve as a candidate biomarker of clinical outcome from immune checkpoint blockades (ICBs)
2,3 in melanoma,
4,5 lung cancer,
6-9 and urothelial carcinoma.
10 However, a considerable proportion of patients with advanced cancer could not provide sufficient tumor tissue for molecular testing.
8,11 Therefore, whether TMB can be measured using circulating tumor DNA (ctDNA) (namely, blood TMB [bTMB]) as a noninvasive approach to guide ICB therapies has attracted widespread attention from practitioners. A previous study
12 found that blood-derived variants of unknown significance were correlated with ICB responses. More recently, Gandara et al
13 reported that bTMB is associated with progression-free survival (PFS) benefit from atezolizumab over docetaxel in non–small cell lung cancers (NSCLCs). Further evaluation of bTMB will be performed in patients undergoing first-line treatment in a prospective, phase 3 randomized clinical trial (A Study of Atezolizumab as First-line Monotherapy for Advanced or Metastatic Non–Small Cell Lung Cancer [B-F1RST]).
14 However, the reliability of ctDNA detection is still under debate
15,16; thus, more supported evidence of bTMB is needed to promote its clinical value on guiding ICB delivery. In this study, we aimed to explore the optimal gene panel size and algorithm to design a CGP for TMB estimation, evaluate the panel reliability, and further validate the feasibility of bTMB as a clinically actionable biomarker for immunotherapy.