Vasileios Vavourakis

Dr. Vasileios Vavourakis

orcid

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 April 2021 in The Breast
Verified
Journal Article
Open access
PGPedro F. Gouveia
Pedro F. Gouveia
JCJoana Costa
Joana Costa
PMPedro Morgado
Pedro Morgado
RKRonald Kates
Ronald Kates
DPDavid Pinto
David Pinto
MCMaria João Cardoso
Maria João Cardoso
Innovations in 3D spatial technology and augmented reality imaging driven by digital high-tech industrial science have accelerated experimental advances in breast cancer imaging and the development of medical procedures aimed to reduce invasiveness. A 57-year-old post-menopausal woman presented with screen-detected left-sided breast cancer. After undergoing all staging and pre-operative studies the patient was proposed for conservative breast surgery with tumor localization. During surgery, an experimental digital and non-invasive intra-operative localization method with augmented reality was compared with the standard pre-operative localization with carbon tattooing (institutional protocol). The breast surgeon wearing an augmented reality headset (Hololens) was able to visualize the tumor location projection inside the patient's left breast in the usual supine position. This work describes, to our knowledge, the first experimental test with a digital non-invasive method for intra-operative breast cancer localization using augmented reality to guide breast conservative surgery. In this case, a successful overlap of the previous standard pre-operative marks with carbon tattooing and tumor visualization inside the patient's breast with augmented reality was obtained. Breast cancer conservative guided surgery with augmented reality can pave the way for a digital non-invasive method for intra-operative tumor localization.

6 January 2016 in Physics in Medicine & Biology
Verified
Journal Article
Open access
PDF file
JHJohn H Hipwell
John H Hipwell
VVVasileios Vavourakis
Vasileios Vavourakis
LHLianghao Han
Lianghao Han
TMThomy Mertzanidou
Thomy Mertzanidou
BEBjörn Eiben
Björn Eiben
DHDavid J Hawkes
David J Hawkes
Breast radiology encompasses the full range of imaging modalities from routine imaging via x-ray mammography, magnetic resonance imaging and ultrasound (both two- and three-dimensional), to more recent technologies such as digital breast tomosynthesis, and dedicated breast imaging systems for positron emission mammography and ultrasound tomography. In addition new and experimental modalities, such as Photoacoustics, Near Infrared Spectroscopy and Electrical Impedance Tomography etc, are emerging. The breast is a highly deformable structure however, and this greatly complicates visual comparison of imaging modalities for the purposes of breast screening, cancer diagnosis (including image guided biopsy), tumour staging, treatment monitoring, surgical planning and simulation of the effects of surgery and wound healing etc. Due primarily to the challenges posed by these gross, non-rigid deformations, development of automated methods which enable registration, and hence fusion, of information within and across breast imaging modalities, and between the images and the physical space of the breast during interventions, remains an active research field which has yet to translate suitable methods into clinical practice. This review describes current research in the field of breast biomechanical modelling and identifies relevant publications where the resulting models have been incorporated into breast image registration and simulation algorithms. Despite these developments there remain a number of issues that limit clinical application of biomechanical modelling. These include the accuracy of constitutive modelling, implementation of representative boundary conditions, failure to meet clinically acceptable levels of computational cost, challenges associated with automating patient-specific model generation (i.e. robust image segmentation and mesh generation) and the complexity of applying biomechanical modelling methods in routine clinical practice.

26 January 2017 in PLOS Computational Biology
Verified
Journal Article
Open access
PDF file
VVVasileios Vavourakis
Vasileios Vavourakis
PWPeter Wijeratne
Peter Wijeratne
RSRebecca Shipley
Rebecca Shipley
Marilena LoizidouMarilena Loizidou
Marilena Loizidou
TSTriantafyllos Stylianopoulos
Triantafyllos Stylianopoulos
DHDavid J. Hawkes
David J. Hawkes
Vascularisation is a key feature of cancer growth, invasion and metastasis. To better understand the governing biophysical processes and their relative importance, it is instructive to develop physiologically representative mathematical models with which to compare to experimental data. Previous studies have successfully applied this approach to test the effect of various biochemical factors on tumour growth and angiogenesis. However, these models do not account for the experimentally observed dependency of angiogenic network evolution on growth-induced solid stresses. This work introduces two novel features: the effects of hapto- and mechanotaxis on vessel sprouting, and mechano-sensitive dynamic vascular remodelling. The proposed three-dimensional, multiscale, in-silico model of dynamically coupled angiogenic tumour growth is specified to in-vivo and in-vitro data, chosen, where possible, to provide a physiologically consistent description. The model is then validated against in-vivo data from murine mammary carcinomas, with particular focus placed on identifying the influence of mechanical factors. Crucially, we find that it is necessary to include hapto- and mechanotaxis to recapitulate observed time-varying spatial distributions of angiogenic vasculature. Angiogenesis is a hallmark of tumour growth and a key feature for invasion and metastasis. Thus, to elucidate the governing biological processes of cancer development, it is instructive to develop physiologically representative mathematical and computational (in-silico) models with which to compare to experimental data. We present a validated, three-dimensional, in-silico model of tumour-induced angiogenesis and growth—unique in the field of mathematical cancer modelling in its biophysical prescription and predictive accuracy. Our novel modelling approach encompasses the effects of both biochemical and biomechanical processes on the development of angiogenic vasculature and solid tumour growth. Unlike other works—which typically focus on biochemical processes—our model depicts a dynamic and coupled biophysical system of the tumour-host microenvironment. In concert with in-vivo experimental data, we have a physiologically-representative in-silico model that enables us to classify and rank the governing biological processes. This yielded the remarkable discovery that it is necessary to include biomechanical factors to accurately describe angiogenic topology. Our model not only provides insight into fundamental cancer biophysics, but is also a powerful tool to aid in our overall objective of re-engineering the tumour microenvironment to optimise the delivery of therapeutic drugs.

28 April 2024 in Cancer Biology & Therapy
Verified
Journal Article
Open access
Nicolò CognoNicolò Cogno
Nicolò Cogno
Cristian AxenieCristian Axenie
Cristian Axenie
Roman BauerRoman Bauer
Roman Bauer
VVVasileios Vavourakis
Vasileios Vavourakis
Computational models are not just appealing because they can simulate and predict the development of biological phenomena across multiple spatial and temporal scales, but also because they can integrate information from well-established in vitro and in vivo models and test new hypotheses in cancer biomedicine. Agent-based models and simulations are especially interesting candidates among computational modeling procedures in cancer research due to the capability to, for instance, recapitulate the dynamics of neoplasia and tumor - host interactions. Yet, the absence of methods to validate the consistency of the results across scales can hinder adoption by turning fine-tuned models into black boxes. This review compiles relevant literature that explores strategies to leverage high-fidelity simulations of multi-scale, or multi-level, cancer models with a focus on verification approached as simulation calibration. We consolidate our review with an outline of modern approaches for agent-based models' validation and provide an ambitious outlook toward rigorous and reliable calibration.

28 July 2016 in PLOS ONE
Verified
Journal Article
Open access
PDF file
VVVasileios Vavourakis
Vasileios Vavourakis
BEBjoern Eiben
Bjoern Eiben
JHJohn H Hipwell
John H Hipwell
NWNorman R Williams
Norman R Williams
MKMo Keshtgar
Mo Keshtgar
DHDavid J Hawkes
David J Hawkes
Surgical treatment for early-stage breast carcinoma primarily necessitates breast conserving therapy (BCT), where the tumour is removed while preserving the breast shape. To date, there have been very few attempts to develop accurate and efficient computational tools that could be used in the clinical environment for pre-operative planning and oncoplastic breast surgery assessment. Moreover, from the breast cancer research perspective, there has been very little effort to model complex mechano-biological processes involved in wound healing. We address this by providing an integrated numerical framework that can simulate the therapeutic effects of BCT over the extended period of treatment and recovery. A validated, three-dimensional, multiscale finite element procedure that simulates breast tissue deformations and physiological wound healing is presented. In the proposed methodology, a partitioned, continuum-based mathematical model for tissue recovery and angiogenesis, and breast tissue deformation is considered. The effectiveness and accuracy of the proposed numerical scheme is illustrated through patient-specific representative examples. Wound repair and contraction numerical analyses of real MRI-derived breast geometries are investigated, and the final predictions of the breast shape are validated against post-operative follow-up optical surface scans from four patients. Mean (standard deviation) breast surface distance errors in millimetres of 3.1 (±3.1), 3.2 (±2.4), 2.8 (±2.7) and 4.1 (±3.3) were obtained, demonstrating the ability of the surgical simulation tool to predict, pre-operatively, the outcome of BCT to clinically useful accuracy.

1 January 2021 in Methods
Verified
Journal Article
Closed access
MHMyrianthi Hadjicharalambous
Myrianthi Hadjicharalambous
PWPeter Wijeratne
Peter Wijeratne
VVVasileios Vavourakis
Vasileios Vavourakis