Lindsey Jane Compton

Dr. Lindsey Jane Compton

School of Biosciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK
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Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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21 May 2022 in Plants
Verified
Journal Article
Open access
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RCRia Cahyaningsih
Ria Cahyaningsih
LCLindsey Jane Compton
Lindsey Jane Compton
SRSri Rahayu
Sri Rahayu
JBJoana Magos Brehm
Joana Magos Brehm
NMNigel Maxted
Nigel Maxted
Over the past decade, plant DNA barcoding has emerged as a scientific breakthrough and is often used to help with species identification or as a taxonomical tool. DNA barcoding is very important in medicinal plant use, not only for identification purposes but also for the authentication of medicinal products. Here, a total of 61 Indonesian medicinal plant species from 30 families and a pair of ITS2, matK, rbcL, and trnL primers were used for a DNA barcoding study consisting of molecular and sequence analyses. This study aimed to analyze how the four identified DNA barcoding regions (ITS2, matK, rbcL, and trnL) aid identification and conservation and to investigate their effectiveness for DNA barcoding for the studied species. This study resulted in 212 DNA barcoding sequences and identified new ones for the studied medicinal plant species. Though there is no ideal or perfect region for DNA barcoding of the target species, we recommend matK as the main region for Indonesian medicinal plant identification, with ITS2 and rbcL as alternative or complementary regions. These findings will be useful for forensic studies that support the conservation of medicinal plants and their national and global use.

10 June 2020 in Heredity
Verified
Journal Article
Open access
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ACAnushree Choudhary
Anushree Choudhary
LWLiam Wright
Liam Wright
OPOlga Ponce
Olga Ponce
JCJing Chen
Jing Chen
APAnkush Prashar
Ankush Prashar
LCLindsey Jane Compton
Lindsey Jane Compton
Naturally occurring autopolyploid species, such as the autotetraploid potato Solanum tuberosum, face a variety of challenges during meiosis. These include proper pairing, recombination and correct segregation of multiple homologous chromosomes, which can form complex multivalent configurations at metaphase I, and in turn alter allelic segregation ratios through double reduction. Here, we present a reference map of meiotic stages in diploid and tetraploid S. tuberosum using fluorescence in situ hybridisation (FISH) to differentiate individual meiotic chromosomes 1 and 2. A diploid-like behaviour at metaphase I involving bivalent configurations was predominant in all three tetraploid varieties. The crossover frequency per bivalent was significantly reduced in the tetraploids compared with a diploid variety, which likely indicates meiotic adaptation to the autotetraploid state. Nevertheless, bivalents were accompanied by a substantial frequency of multivalents, which varied by variety and by chromosome (7–48%). We identified possible sites of synaptic partner switching, leading to multivalent formation, and found potential defects in the polymerisation and/or maintenance of the synaptonemal complex in tetraploids. These findings demonstrate the rise of S. tuberosum as a model for autotetraploid meiotic recombination research and highlight constraints on meiotic chromosome configurations and chiasma frequencies as an important feature of an evolved autotetraploid meiosis.

25 February 2021 in Journal of Further and Higher Education
Verified
Journal Article
Closed access
ABAdrian Bromage
Adrian Bromage
SPSarah Pierce
Sarah Pierce
TRTom Reader
Tom Reader
LCLindsey Jane Compton
Lindsey Jane Compton
Training in research methods is a crucial component of the student experience in further and higher education. A common set of statistical and experimental design methods are taught across a broad range of non-mathematics disciplines, spanning STEM subjects, medicine, and the social sciences. Understanding these methods is central to students’ ability to engage with their course, tutors, and the literature. It is also the key to enabling students to become not only practitioners of their chosen subject, but also statistically literate citizens, capable of understanding and evaluating everyday statistics. The first aim of this paper is to review the specific set of challenges faced by staff and students teaching and learning statistics within non-mathematics disciplines. Secondly, we review best practice and current trends in the design of motivating and effective statistics courses for non-specialists. Our findings suggest that many of the key challenges stem from negative attitudes towards statistics coupled with poor motivation to study the subject, factors which are exacerbated by statistics anxiety. Fortunately, because these challenges are so widespread, and have attracted the attention of innovative educators across broad disciplines, there is a wealth of good ideas and resources available to statistics teachers seeking ways to create effective learning experiences.

27 September 2022 in Frontiers in Plant Science
Verified
Journal Article
Open access
OPOlga Patricia Ponce
Olga Patricia Ponce
YTYerisf Torres
Yerisf Torres
APAnkush Prashar
Ankush Prashar
RBRobin Buell
Robin Buell
RLRoberto Lozano
Roberto Lozano
LCLindsey Jane Compton
Lindsey Jane Compton
Potato is a drought-sensitive crop whose global sustainable production is threatened by alterations in water availability. Whilst ancestral Solanum tuberosum Andigenum landraces retain wild drought tolerance mechanisms, their molecular bases remain poorly understood. In this study, an aeroponic growth system was established to investigate stress responses in leaf and root of two Andigenum varieties with contrasting drought tolerance. Comparative transcriptome analysis revealed widespread differences in the response of the two varieties at early and late time points of exposure to drought stress and in the recovery after rewatering. Major differences in the response of the two varieties occurred at the early time point, suggesting the speed of response is crucial. In the leaves and roots of the tolerant variety, we observed rapid upregulation of ABA-related genes, which did not occur until later in the susceptible variety and indicated not only more effective ABA synthesis and mobilization, but more effective feedback regulation to limit detrimental effects of too much ABA. Roots of both varieties showed differential expression of genes involved in cell wall reinforcement and remodeling to maintain cell wall strength, hydration and growth under drought stress, including genes involved in lignification and wall expansion, though the response was stronger in the tolerant variety. Such changes in leaf and root may help to limit water losses in the tolerant variety, while limiting the reduction in photosynthetic rate. These findings provide insights into molecular bases of drought tolerance mechanisms and pave the way for their reintroduction into modern cultivars with improved resistance to drought stress and yield stability under drought conditions.

29 October 2021 in Clinical Parkinsonism & Related Disorders
Verified
Journal Article
Open access
AHAlison Hall
Alison Hall
SWSamuel R. Weaver
Samuel R. Weaver
LCLindsey Jane Compton
Lindsey Jane Compton
WBWinston D. Byblow
Winston D. Byblow
NJNed Jenkinson
Ned Jenkinson
HMHayley J. MacDonald
Hayley J. MacDonald
Up to 40% of Parkinson’s disease patients taking dopamine agonist medication develop impulse control behaviors which can have severe negative consequences. The current study aimed to utilize dopamine genetics to identify patients most at risk of developing these behaviors. Demographic, clinical, and genetic data were obtained from the Parkinson’s Progression Markers Initiative for de novo patients (n = 327), patients taking dopamine agonists (n = 146), and healthy controls (n = 160). Impulsive behaviors were identified using the Questionnaire for Impulsive-Compulsive Disorders in Parkinson’s Disease. A dopamine genetic risk score was calculated for each patient according to polymorphisms in genes coding for dopamine D1, D2 and D3 receptors, and catechol-O-methyltransferase. A higher score reflected higher central dopamine neurotransmission. Patients on agonists with a low dopamine genetic risk score were over 18 times more likely to have an impulsive behavior compared to higher scores (p = 0.04). The 38% of patients taking agonists who had at least one impulsive behavior were more likely to be male and report higher Unified Parkinson’s Disease Rating Scale I&II scores. With increasing time on dopamine agonists (range 92–2283 days, mean 798 ± 565 standard deviation), only patients with a high dopamine genetic risk score showed an increase in number of impulsive behaviors (p = 0.033). Predictive effects of the gene score were not present in de novo or healthy control. A dopamine genetic risk score can identify patients most at risk of developing impulsive behaviors on dopamine agonist medication and predict how these behaviors may worsen over time.

9 November 2020 in Heredity
Verified
Journal Article
Closed access
PDF file
ABAlison R. Bentley
Alison R. Bentley
LCLindsey Jane Compton
Lindsey Jane Compton