Malak Abdullah

Dr. Malak Abdullah


Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 June 2021 in PeerJ Computer Science
Verified
Journal Article
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AAAyat Abedalla
Ayat Abedalla
MAMalak Abdullah
Malak Abdullah
MAMahmoud Al-Ayyoub
Mahmoud Al-Ayyoub
EBElhadj Benkhelifa
Elhadj Benkhelifa
Medical imaging refers to visualization techniques to provide valuable information about the internal structures of the human body for clinical applications, diagnosis, treatment, and scientific research. Segmentation is one of the primary methods for analyzing and processing medical images, which helps doctors diagnose accurately by providing detailed information on the body’s required part. However, segmenting medical images faces several challenges, such as requiring trained medical experts and being time-consuming and error-prone. Thus, it appears necessary for an automatic medical image segmentation system. Deep learning algorithms have recently shown outstanding performance for segmentation tasks, especially semantic segmentation networks that provide pixel-level image understanding. By introducing the first fully convolutional network (FCN) for semantic image segmentation, several segmentation networks have been proposed on its basis. One of the state-of-the-art convolutional networks in the medical image field is U-Net. This paper presents a novel end-to-end semantic segmentation model, named Ens4B-UNet, for medical images that ensembles four U-Net architectures with pre-trained backbone networks. Ens4B-UNet utilizes U-Net’s success with several significant improvements by adapting powerful and robust convolutional neural networks (CNNs) as backbones for U-Nets encoders and using the nearest-neighbor up-sampling in the decoders. Ens4B-UNet is designed based on the weighted average ensemble of four encoder-decoder segmentation models. The backbone networks of all ensembled models are pre-trained on the ImageNet dataset to exploit the benefit of transfer learning. For improving our models, we apply several techniques for training and predicting, including stochastic weight averaging (SWA), data augmentation, test-time augmentation (TTA), and different types of optimal thresholds. We evaluate and test our models on the 2019 Pneumothorax Challenge dataset, which contains 12,047 training images with 12,954 masks and 3,205 test images. Our proposed segmentation network achieves a 0.8608 mean Dice similarity coefficient (DSC) on the test set, which is among the top one-percent systems in the Kaggle competition.

Verified
Journal Article
Open access
PDF file
MGMaha Gharaibeh
Maha Gharaibeh
DADalia Alzu'bi
Dalia Alzu'bi
MAMalak Abdullah
Malak Abdullah
IHIsmail Hmeidi
Ismail Hmeidi
Mohammad Rustom Al NasarMohammad Rustom Al Nasar
Mohammad Rustom Al Nasar
Amir H GandomiAmir H Gandomi
Amir H Gandomi
Plenty of disease types exist in world communities that can be explained by humans’ lifestyles or the economic, social, genetic, and other factors of the country of residence. Recently, most research has focused on studying common diseases in the population to reduce death risks, take the best procedure for treatment, and enhance the healthcare level of the communities. Kidney Disease is one of the common diseases that have affected our societies. Sectionicularly Kidney Tumors (KT) are the 10th most prevalent tumor for men and women worldwide. Overall, the lifetime likelihood of developing a kidney tumor for males is about 1 in 466 (2.02 percent) and it is around 1 in 80 (1.03 percent) for females. Still, more research is needed on new diagnostic, early, and innovative methods regarding finding an appropriate treatment method for KT. Compared to the tedious and time-consuming traditional diagnosis, automatic detection algorithms of machine learning can save diagnosis time, improve test accuracy, and reduce costs. Previous studies have shown that deep learning can play a role in dealing with complex tasks, diagnosis and segmentation, and classification of Kidney Tumors, one of the most malignant tumors. The goals of this review article on deep learning in radiology imaging are to summarize what has already been accomplished, determine the techniques used by the researchers in previous years in diagnosing Kidney Tumors through medical imaging, and identify some promising future avenues, whether in terms of applications or technological developments, as well as identifying common problems, describing ways to expand the data set, summarizing the knowledge and best practices, and determining remaining challenges and future directions.

5 December 2022 in PeerJ Computer Science
Verified
Journal Article
Open access
PDF file
RORasha Obeidat
Rasha Obeidat
MGMaram Gharaibeh
Maram Gharaibeh
MAMalak Abdullah
Malak Abdullah
YAYara Alharahsheh
Yara Alharahsheh
Since the inception of the current COVID-19 pandemic, related misleading information has spread at a remarkable rate on social media, leading to serious implications for individuals and societies. Although COVID-19 looks to be ending for most places after the sharp shock of Omicron, severe new variants can emerge and cause new waves, especially if the variants can evade the insufficient immunity provided by prior infection and incomplete vaccination. Fighting the fake news that promotes vaccine hesitancy, for instance, is crucial for the success of the global vaccination programs and thus achieving herd immunity. To combat the proliferation of COVID-19-related misinformation, considerable research efforts have been and are still being dedicated to building and sharing COVID-19 misinformation detection datasets and models for Arabic and other languages. However, most of these datasets provide binary (true/false) misinformation classifications. Besides, the few studies that support multi-class misinformation classification deal with a small set of misinformation classes or mix them with situational information classes. False news stories about COVID-19 are not equal; some tend to have more sinister effects than others (e.g., fake cures and false vaccine info). This suggests that identifying the sub-type of misinformation is critical for choosing the suitable action based on their level of seriousness, ranging from assigning warning labels to the susceptible post to removing the misleading post instantly. We develop comprehensive annotation guidelines in this work that define 19 fine-grained misinformation classes. Then, we release the first Arabic COVID-19-related misinformation dataset comprising about 6.7K tweets with multi-class and multi-label misinformation annotations. In addition, we release a version of the dataset to be the first Twitter Arabic dataset annotated exclusively with six different situational information classes. Identifying situational information (e.g., caution, help-seeking) helps authorities or individuals understand the situation during emergencies. To confirm the validity of the collected data, we define three classification tasks and experiment with various machine learning and transformer-based classifiers to offer baseline results for future research. The experimental results indicate the quality and validity of the data and its suitability for constructing misinformation and situational information classification models. The results also demonstrate the superiority of AraBERT-COV19, a transformer-based model pretrained on COVID-19-related tweets, with micro-averaged F-scores of 81.6% and 78.8% for the multi-class misinformation and situational information classification tasks, respectively. Label Powerset with linear SVC achieved the best performance among the presented methods for multi-label misinformation classification with micro-averaged F-scores of 76.69%.

1 January 2019
Verified
Conference Paper
Open access
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HAHani Al-Omari
Hani Al-Omari
MAMalak Abdullah
Malak Abdullah
OAOla AlTiti
Ola AlTiti
SSSamira Shaikh
Samira Shaikh
Hani Al-Omari, Malak Abdullah, Ola AlTiti, Samira Shaikh. Proceedings of the Second Workshop on Natural Language Processing for Internet Freedom: Censorship, Disinformation, and Propaganda. 2019.

1 June 2023 in IAES International Journal of Artificial Intelligence (IJ-AI)
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Journal Article
Open access
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MAMalak Abdullah
Malak Abdullah
MAMahmoud Al-Ayyoub
Mahmoud Al-Ayyoub
FSFarah Shatnawi
Farah Shatnawi
SRSaif Rawashdeh
Saif Rawashdeh
RARob Abbott
Rob Abbott
The outbreak of coronavirus disease 2019 (COVID-19) drives most higher education systems in many countries to stop face-to-face learning. Accordingly, many universities, including Jordan University of Science and Technology (JUST), changed the teaching method from face-to-face education to electronic learning from a distance. This research paper investigated the impact of the e-learning experience on the students during the spring semester of 2020 at JUST. It also explored how to predict students’ academic performances using e-learning data. Consequently, we collected students’ datasets from two resources: the center for e-learning and open educational resources and the admission and registration unit at the university. Five courses in the spring semester of 2020 were targeted. In addition, four regression machine learning algorithms had been used in this study to generate the predictions: random forest (RF), Bayesian ridge (BR), adaptive boosting (AdaBoost), and extreme gradient boosting (XGBoost). The results showed that the ensemble model for RF and XGBoost yielded the best performance. Finally, it is worth mentioning that among all the e-learning components and events, quiz events had a significant impact on predicting the student’s academic performance. Moreover, the paper shows that the activities between weeks 9 and 12 influenced students’ performances during the semester.