Nicolas Rougier

Dr. Nicolas Rougier

Inria Bordeaux Sud-Ouest, Talence, France - Institut des Maladies Neurodégénératives, Bordeaux, France – Laboratoire Bordelais d’Informatique, Talence, France – Université de Bordeaux, Bordeaux, France

Research Focus & Metrics

Academic Career Length

27Years (2000-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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9 May 2005 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
NRNicolas Rougier
Nicolas Rougier
DNDavid C. Noelle
David C. Noelle
TBTodd S. Braver
Todd S. Braver
JCJonathan D. Cohen
Jonathan D. Cohen
RORandall C. O'REilly
Randall C. O'REilly
Human cognitive control is uniquely flexible and has been shown to depend on prefrontal cortex (PFC). But exactly how the biological mechanisms of the PFC support flexible cognitive control remains a profound mystery. Existing theoretical models have posited powerful task-specific PFC representations, but not how these develop. We show how this can occur when a set of PFC-specific neural mechanisms interact with breadth of experience to self organize abstract rule-like PFC representations that support flexible generalization in novel tasks. The same model is shown to apply to benchmark PFC tasks (Stroop and Wisconsin card sorting), accurately simulating the behavior of neurologically intact and frontally damaged people.

11 September 2014 in PLOS Computational Biology
Verified
Journal Article
Open access
PDF file
NRNicolas Rougier
Nicolas Rougier
MDMichael Droettboom
Michael Droettboom
PBPhilip E. Bourne
Philip E. Bourne
International audienceScientific visualization is classically defined as the process of graphically displaying scientific data. However, this process is far from direct or automatic. There are so many different ways to represent the same data: scatter plots, linear plots, bar plots, and pie charts, to name just a few. Furthermore, the same data, using the same type of plot, may be perceived very differently depending on who is looking at the figure. A more accurate definition for scientific visualiza- tion would be a graphical interface between people and data. In this short article, we do not pretend to explain everything about this interface; rather, see [1,2] for introductory work. Instead we aim to provide a basic set of rules to improve figure design and to explain some of the common pitfalls

18 December 2017 in PeerJ Computer Science
Verified
Journal Article
Open access
PDF file
NRNicolas Rougier
Nicolas Rougier
KHKonrad Hinsen
Konrad Hinsen
FAFrédéric Alexandre
Frédéric Alexandre
TAThomas Arildsen
Thomas Arildsen
LBLorena A. Barba
Lorena A. Barba
TZTiziano Zito
Tiziano Zito
Computer science offers a large set of tools for prototyping, writing, running, testing, validating, sharing and reproducing results; however, computational science lags behind. In the best case, authors may provide their source code as a compressed archive and they may feel confident their research is reproducible. But this is not exactly true. James Buckheit and David Donoho proposed more than two decades ago that an article about computational results is advertising, not scholarship. The actual scholarship is the full software environment, code, and data that produced the result. This implies new workflows, in particular in peer-reviews. Existing journals have been slow to adapt: source codes are rarely requested and are hardly ever actually executed to check that they produce the results advertised in the article. ReScience is a peer-reviewed journal that targets computational research and encourages the explicit replication of already published research, promoting new and open-source implementations in order to ensure that the original research can be replicated from its description. To achieve this goal, the whole publishing chain is radically different from other traditional scientific journals. ReScience resides on GitHub where each new implementation of a computational study is made available together with comments, explanations, and software tests.

4 January 2018 in Frontiers in Neuroinformatics
Verified
Journal Article
Open access
FBFabien C. Y. Benureau
Fabien C. Y. Benureau
NRNicolas Rougier
Nicolas Rougier
Scientific code is different from production software. Scientific code, by producing results that are then analyzed and interpreted, participates in the elaboration of scientific conclusions. This imposes specific constraints on the code that are often overlooked in practice. We articulate, with a small example, five characteristics that a scientific code in computational science should possess: re-runnable, repeatable, reproducible, reusable, and replicable. The code should be executable (re-runnable) and produce the same result more than once (repeatable); it should allow an investigator to reobtain the published results (reproducible) while being easy to use, understand and modify (reusable), and it should act as an available reference for any ambiguity in the algorithmic descriptions of the article (replicable).

1 May 2011 in Neurocomputing
Verified
Journal Article
Closed access
NRNicolas Rougier
Nicolas Rougier
YBYann Boniface
Yann Boniface

15 May 2020 in Science Advances
Verified
Journal Article
Open access
PDF file
MBM. Bourdenx
M. Bourdenx
ANA. Nioche
A. Nioche
SDS. Dovero
S. Dovero
MAMarie-Laure AROTCARENA
Marie-Laure AROTCARENA
SCS. Camus
S. Camus
Erwan BezardErwan Bezard
Erwan Bezard
Machine learning–based approach unravels distinct pathological signatures induced by patient-derived α-synuclein seeds in monkeys.