Drought is a major constrain in crop production that reduce growth and cause yield loss of up to 70%. Transcription factor plays a major role in cellular regulation and physical changes of plants as a response to stress. A number of transcription factors, such as CBF/DREB, NAC, zinc finger protein are regulators during stress. The Oryza sativa NAC6 (OsNAC6) gene is one of the transcription factor in rice that can regulate gene expression during stress conditions. Thus, pCambia 1305 harboring OsNAC6 chimaeric gene with CaMV 35S promoter was introduced into rice zygotic embryo using Agrobacterium tumefaciens mediated transformation to regenerate transgenic rice overexpressing the transgene. As many as 39 putative transgenic lines in which 21 lines possitively harbored hpt gene have been regenerated. The positive identification of hpt in the regenerated transgenic rice indirectly indicated integration of the targeted OsNAC6 since both transgenes were part of the same T-DNA. Further analysis indicated the presence of 1-3 copies of transgene integration in the genome. The expression of OsNAC6 transgene in the transgenic rice line#C.73, C.83 and C.91 were higher than wild type non-transgenic one. Further analysis indicated those three transgenic lines carrying OsNAC6 transgene exhibited higher tolerance against drought and salinity stresses. Moreover, three known stress-associated regulatory genes (AP2, Zincfinger protein and MYB) were up-regulated in those three transgenic lines. These findings demonstrated that OsNAC6 might be a candidate of stress-responsive NAC regulatory gene that can be used to develop either drought or salt tolerant tolerant transgenic plants.

Abaca (Musa textilis Nee) is an important industrial crop. Its cultivation in Indonesia is, however, hampered by the wilt (Panama disease) caused by Fusarium oxysporum f.sp. cubense (Foc) infections. Developing Foc resistance abaca lines require availability of established and reliable screening methods for resistance against Foc. The objectives of this study were to evaluate the (i) effectiveness of Foc inoculation methods, (ii) extent of Foc conidial densities — for causing the wilt in abaca, and (iii) responses of ten abaca cultivars against Foc infection. Results of this study showed that the method of inoculation by wounding abaca roots followed submerging the wounded plant in suspension of Foc conidia (106 conidia/ml) for 2 hours before planting was the most effective method for causing the wilt. Among ten abaca cultivars tested, none was resistant to Foc infection. Based on the calculation of disease intensity, nine abaca cultivars were identified as very susceptible, where as one cultivar was susceptible to Foc infection

Sago palm (Metroxylon sagu Rottb.) is one of the most productive carbohydrate-producing crops. Unfortunately, only limited information regarding sago palm genetics is available. This study aimed to develop simple sequence repeat (SSR) markers using sago palm NGS genomic data and use these markers to evaluate the genetic diversity of sago palm from Indonesia. De novo assembly of partial sago palm genomic data and subsequent SSR mining identified 29,953 contigs containing 31,659 perfect SSR loci and 31,578 contigs with 33,576 imperfect SSR loci. The perfect SSR loci density was 132.57/Mb, and AG, AAG and AAAT were the most frequent SSR motifs. Five hundred perfect SSR loci were randomly selected and used for designing SSR primers; 93 SSR primer pairs were identified. After synteny analysis using rice genome sequences, 20 primer pairs were validated using 11 sago palm accessions, and seven primers generated polymorphic alleles. Genetic diversity analysis of 41 sago palm accessions from across Indonesia using polymorphic SSR loci indicated the presence of three clusters. These results demonstrated the success of SSR identification and marker development for sago palm based on NGS genome data, which can be further used for assisting sago palm breeding in the future.

ISHS XXIX International Horticultural Congress on Horticulture: Sustaining Lives, Livelihoods and Landscapes (IHC2014): International Symposia on Innovative Plant Protection in Horticulture, Biosecurity, Quarantine Pests, and Market Access Biomatriconditioning or biopriming with biofungicides or biological agents applied on hot pepper (Capsicum annuum L.) seeds reduced seedborne Colletotrichum capsici and increased seed quality and yield

This study aimed to develop the cacao (Theobroma cacao L.) in vitro regeneration system through somatic embryogenesis on kinetin supplemented DKW medium and somaclonal variation assessment using SSR markers. Callus were initiated from basal petal and staminoid explants cultured on callus induction (CI) medium contained DKW basalt salts and kinetin:2,4-D ratios of 1:15.5, 1:7.8 or 1:3.9 and then transferred onto secondary callus growth (SCG) medium contained WPM basalt salts and kinetin:2,4-D ratios of 1:7.8 or 1:3.9. The calli were then subsequently transferred onto embryo development medium contained DKW basal salts with or without the addition of amino acids, adenine or activated charcoal for the formation of somatic embryos. Nine cacao genotypes were tested for their ability to develop somatic embryos. Results of this study indicated DKW medium supplemented with Kinetin in combination with 2,4-D effectively induced cacao somatic embryogenesis. The highest somatic embryos formation was abtained from kinetin:2,4-D ratio of 1:3.9 and 1:7.8 in CI and SCG medium respectively. Cacao genotype responses were highly explant type dependent. The developed method resulted in a high percentage of somatic embryo formation (5.6-66.7%), germination (50%) and plantlet conversion (65%) and a medium percentage of somaclonal variations based on SSRs marker analysis.