John Nielsen

John Nielsen


Research Focus & Metrics

Academic Career Length

43Years (1984-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 March 2005 in Journal of Bacteriology
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TRThomas Bovbjerg Rasmussen
Thomas Bovbjerg Rasmussen
TBThomas Bjarnsholt
Thomas Bjarnsholt
MSMette Elena Skindersoe
Mette Elena Skindersoe
MHMorten Hentzer
Morten Hentzer
PKPeter Kristoffersen
Peter Kristoffersen
MGMichael Givskov
Michael Givskov
With the widespread appearance of antibiotic-resistant bacteria, there is an increasing demand for novel strategies to control infectious diseases. Furthermore, it has become apparent that the bacterial life style also contributes significantly to this problem. Bacteria living in the biofilm mode of growth tolerate conventional antimicrobial treatments. The discovery that many bacteria use quorum-sensing (QS) systems to coordinate virulence and biofilm development has pointed out a new, promising target for antimicrobial drugs. We constructed a collection of screening systems, QS inhibitor (QSI) selectors, which enabled us to identify a number of novel QSIs among natural and synthetic compound libraries. The two most active were garlic extract and 4-nitro-pyridine- N -oxide (4-NPO). GeneChip-based transcriptome analysis revealed that garlic extract and 4-NPO had specificity for QS-controlled virulence genes in Pseudomonas aeruginosa . These two QSIs also significantly reduced P. aeruginosa biofilm tolerance to tobramycin treatment as well as virulence in a Caenorhabditis elegans pathogenesis model.

1 October 1993 in Journal of the American Chemical Society
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JNJohn Nielsen
John Nielsen
SBSydney Brenner
Sydney Brenner
KJKim D. Janda
Kim D. Janda

30 June 2010 in Proceedings Of The Royal Society B-Biological Sciences
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LHLuke Holman
Luke Holman
CJCharlotte G. Jørgensen
Charlotte G. Jørgensen
JNJohn Nielsen
John Nielsen
PDPatrizia D'Ettorre
Patrizia D'Ettorre
The selective forces that shape and maintain eusocial societies are an enduring puzzle in evolutionary biology. Ordinarily sterile workers can usually reproduce given the right conditions, so the factors regulating reproductive division of labour may provide insight into why eusociality has persisted over evolutionary time. Queen-produced pheromones that affect worker reproduction have been implicated in diverse taxa, including ants, termites, wasps and possibly mole rats, but to date have only been definitively identified in the honeybee. Using the black garden antLasius niger, we isolate the first sterility-regulating ant queen pheromone. The pheromone is a cuticular hydrocarbon that comprises the majority of the chemical profile of queens and their eggs, and also affects worker behaviour, by reducing aggression towards objects bearing the pheromone. We further show that the pheromone elicits a strong response in worker antennae and that its production by queens is selectively reduced following an immune challenge. These results suggest that the pheromone has a central role in colony organization and support the hypothesis that worker sterility represents altruistic self-restraint in response to an honest quality signal.

1 December 2004 in Organic & Biomolecular Chemistry
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TPTobias Persson
Tobias Persson
THThomas H. Hansen
Thomas H. Hansen
TRThomas B. Rasmussen
Thomas B. Rasmussen
MSMette E. Skindersø
Mette E. Skindersø
MGMichael Givskov
Michael Givskov
JNJohn Nielsen
John Nielsen
Parallel solution-phase synthesis of sulfide AHL analogues (10a–s) by one-pot or a sequential approach is reported. The corresponding sulfoxides 13a–e and sulfones 14a–e were prepared to expand the diversity of the 19-member array of sulfides 10a–s. Likewise, dithianes 12a–c were prepared with similarity both to sulfides 10a–s and to bioactive structures from garlic. Design and biological screening of all compounds presented in this work targeted inhibition of quorum-sensing comprising competitive inhibition of transcriptional regulators LuxR and LasR. The design was based on critical interactions within the binding-site and structural motifs in molecular components isolated from garlic, 7 and 8, shown to be quorum-sensing inhibitors but not antibiotics. A potent quorum-sensing inhibitor N-(heptylsulfanylacetyl)-L-homoserine lactone (10c) was identified. Together with data collected for the other analogues, the resulting structure–activity relationship led to a hypothesis in which competitive binding was assumed.

1 April 2009 in Proceedings Of The Royal Society B-Biological Sciences
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FGFernando J. Guerrieri
Fernando J. Guerrieri
NVNehring Volker
Nehring Volker
CJCharlotte G. Jørgensen
Charlotte G. Jørgensen
JNJohn Nielsen
John Nielsen
CGC. Giovanni Galizia
C. Giovanni Galizia
PDPatrizia D'ETtorre
Patrizia D'ETtorre
Discriminating among individuals and rejecting non-group members is essential for the evolution and stability of animal societies. Ants are good models for studying recognition mechanisms, because they are typically very efficient in discriminating ‘friends’ (nest-mates) from ‘foes’ (non-nest-mates). Recognition in ants involves multicomponent cues encoded in cuticular hydrocarbon profiles. Here, we tested whether workers of the carpenter ant Camponotus herculeanus use the presence and/or absence of cuticular hydrocarbons to discriminate between nest-mates and non-nest-mates. We supplemented the cuticular profile with synthetic hydrocarbons mixed to liquid food and then assessed behavioural responses using two different bioassays. Our results show that (i) the presence, but not the absence, of an additional hydrocarbon elicited aggression and that (ii) among the three classes of hydrocarbons tested (unbranched, mono-methylated and dimethylated alkanes; for mono-methylated alkanes, we present a new synthetic pathway), only the dimethylated alkane was effective in eliciting aggression. Our results suggest that carpenter ants use a fundamentally different mechanism for nest-mate recognition than previously thought. They do not specifically recognize nest-mates, but rather recognize and reject non-nest-mates bearing odour cues that are novel to their own colony cuticular hydrocarbon profile. This begs for a reappraisal of the mechanisms underlying recognition systems in social insects.

21 July 2006 in Molecular Microbiology
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RFRasmus John Normand Frandsen
Rasmus John Normand Frandsen
NNNikoline Juul Nielsen
Nikoline Juul Nielsen
NMNicolai Maolanon
Nicolai Maolanon
JSJens C. Sørensen
Jens C. Sørensen
Stefan OlssonStefan Olsson
Stefan Olsson
HGHenriette Giese
Henriette Giese
Summary: Fungal polyketide biosynthesis typically involves multiple enzymatic steps and the encoding genes are often found in gene clusters. A gene cluster containing PKS12, the polyketide synthase gene responsible for the synthesis of the pigment aurofusarin, was analysed by gene replacement using Agrobacterium tumefaciens‐mediated transformation to determine the biosynthesis pathway of aurofusarin. Replacement of aurR1 with hygB shows that it encodes a positively acting transcription factor that is required for the full expression of PKS12, aurJ, aurF, gip1 and FG02329.1, which belong to the gene cluster. AurR1 and PKS12 deletion mutants are unable to produce aurofusarin and rubrofusarin. Bio‐ and chemoinformatics combined with chemical analysis of replacement mutants (ΔaurJ, ΔaurF, Δgip1, ΔaurO and ΔPKS12) indicate a five‐step enzyme catalysed pathway for the biosynthesis of aurofusarin, with rubrofusarin as an intermediate. This links the biosynthesis of naphthopyrones and naphthoquinones together. Replacement of the putative transcription factor aurR2 results in an increased level of rubrofusarin relative to aurofusarin. Gip1, a putative laccase, is proposed to be responsible for the dimerization of two oxidized rubrofusarin molecules resulting in the formation of aurofusarin.