Madlene Nussbaum

Dr. Madlene Nussbaum

School of Agricultural, Forest and Food Sciences (BFH-HAFL), Bern University of Applied Sciences, Bern, Switzerland

Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
10 January 2018 in SOIL
Verified
Journal Article
Open access
PDF file
MNMadlene Nussbaum
Madlene Nussbaum
KSKay Spiess
Kay Spiess
ABAndri Baltensweiler
Andri Baltensweiler
UGUrs Grob
Urs Grob
AKArmin Keller
Armin Keller
APAndreas Papritz
Andreas Papritz
The spatial assessment of soil functions requires maps of basic soil properties. Unfortunately, these are either missing for many regions or are not available at the desired spatial resolution or down to the required soil depth. The field-based generation of large soil datasets and conventional soil maps remains costly. Meanwhile, legacy soil data and comprehensive sets of spatial environmental data are available for many regions.Digital soil mapping (DSM) approaches relating soil data (responses) to environmental data (covariates) face the challenge of building statistical models from large sets of covariates originating, for example, from airborne imaging spectroscopy or multi-scale terrain analysis. We evaluated six approaches for DSM in three study regions in Switzerland (Berne, Greifensee, ZH forest) by mapping the effective soil depth available to plants (SD), pH, soil organic matter (SOM), effective cation exchange capacity (ECEC), clay, silt, gravel content and fine fraction bulk density for four soil depths (totalling 48 responses). Models were built from 300–500 environmental covariates by selecting linear models through (1) grouped lasso and (2) an ad hoc stepwise procedure for robust external-drift kriging (georob). For (3) geoadditive models we selected penalized smoothing spline terms by component-wise gradient boosting (geoGAM). We further used two tree-based methods: (4) boosted regression trees (BRTs) and (5) random forest (RF). Lastly, we computed (6) weighted model averages (MAs) from the predictions obtained from methods 1–5.Lasso, georob and geoGAM successfully selected strongly reduced sets of covariates (subsets of 3–6 % of all covariates). Differences in predictive performance, tested on independent validation data, were mostly small and did not reveal a single best method for 48 responses. Nevertheless, RF was often the best among methods 1–5 (28 of 48 responses), but was outcompeted by MA for 14 of these 28 responses. RF tended to over-fit the data. The performance of BRT was slightly worse than RF. GeoGAM performed poorly on some responses and was the best only for 7 of 48 responses. The prediction accuracy of lasso was intermediate. All models generally had small bias. Only the computationally very efficient lasso had slightly larger bias because it tended to under-fit the data. Summarizing, although differences were small, the frequencies of the best and worst performance clearly favoured RF if a single method is applied and MA if multiple prediction models can be developed.

25 June 2014 in Geoscientific Model Development
Verified
Journal Article
Open access
MNMadlene Nussbaum
Madlene Nussbaum
APA. Papritz
A. Papritz
ABAndri Baltensweiler
Andri Baltensweiler
LWL. Walthert
L. Walthert
Accurate estimates of soil organic carbon (SOC) stocks are required to quantify carbon sources and sinks caused by land use change at national scale. This study presents a novel robust kriging method to precisely estimate regional and national mean SOC stocks, along with truthful standard errors. We used this new approach to estimate mean forest SOC stock for Switzerland and for its five main ecoregions. Using data of 1033 forest soil profiles, we modelled stocks of two compartments (0–30, 0–100 cm depth) of mineral soils. Log-normal regression models that accounted for correlation between SOC stocks and environmental covariates and residual (spatial) auto-correlation were fitted by a newly developed robust restricted maximum likelihood method, which is insensitive to outliers in the data. Precipitation, near-infrared reflectance, topographic and aggregated information of a soil and a geotechnical map were retained in the models. Both models showed weak but significant residual autocorrelation. The predictive power of the fitted models, evaluated by comparing predictions with independent data of 175 soil profiles, was moderate (robust R2 = 0.34 for SOC stock in 0–30 cm and R2 = 0.40 in 0–100 cm). Prediction standard errors (SE), validated by comparing point prediction intervals with data, proved to be conservative. Using the fitted models, we mapped forest SOC stock by robust external-drift point kriging at high resolution across Switzerland. Predicted mean stocks in 0–30 and 0–100 cm depth were equal to 7.99 kg m−2 (SE 0.15 kg m−2) and 12.58 kg m−2 (SE 0.24 kg m−2), respectively. Hence, topsoils store about 64% of SOC stocks down to 100 cm depth. Previous studies underestimated SOC stocks of topsoil slightly and those of subsoils strongly. The comparison further revealed that our estimates have substantially smaller SE than previous estimates.

16 November 2017 in SOIL
Verified
Journal Article
Open access
PDF file
MNMadlene Nussbaum
Madlene Nussbaum
LWLorenz Walthert
Lorenz Walthert
MFMarielle Fraefel
Marielle Fraefel
LGLucie Greiner
Lucie Greiner
APAndreas Papritz
Andreas Papritz
High-resolution maps of soil properties are a prerequisite for assessing soil threats and soil functions and for fostering the sustainable use of soil resources. For many regions in the world, accurate maps of soil properties are missing, but often sparsely sampled (legacy) soil data are available. Soil property data (response) can then be related by digital soil mapping (DSM) to spatially exhaustive environmental data that describe soil-forming factors (covariates) to create spatially continuous maps. With airborne and space-borne remote sensing and multi-scale terrain analysis, large sets of covariates have become common. Building parsimonious models amenable to pedological interpretation is then a challenging task. We propose a new boosted geoadditive modelling framework (geoGAM) for DSM. The geoGAM models smooth non-linear relations between responses and single covariates and combines these model terms additively. Residual spatial autocorrelation is captured by a smooth function of spatial coordinates, and non-stationary effects are included through interactions between covariates and smooth spatial functions. The core of fully automated model building for geoGAM is component-wise gradient boosting. We illustrate the application of the geoGAM framework by using soil data from the Canton of Zurich, Switzerland. We modelled effective cation exchange capacity (ECEC) in forest topsoils as a continuous response. For agricultural land we predicted the presence of waterlogged horizons in given soil depths as binary and drainage classes as ordinal responses. For the latter we used proportional odds geoGAM, taking the ordering of the response properly into account. Fitted geoGAM contained only a few covariates (7 to 17) selected from large sets (333 covariates for forests, 498 for agricultural land). Model sparsity allowed for covariate interpretation through partial effects plots. Prediction intervals were computed by model-based bootstrapping for ECEC. The predictive performance of the fitted geoGAM, tested with independent validation data and specific skill scores for continuous, binary and ordinal responses, compared well with other studies that modelled similar soil properties. Skill score (SS) values of 0.23 to 0.53 (with SS = 1 for perfect predictions and SS = 0 for zero explained variance) were achieved depending on the response and type of score. GeoGAM combines efficient model building from large sets of covariates with effects that are easy to interpret and therefore likely raises the acceptance of DSM products by end-users.

14 July 2023 in Geoderma
Verified
Journal Article
Open access
MNMadlene Nussbaum
Madlene Nussbaum
SZStephan Zimmermann
Stephan Zimmermann
LWLorenz Walthert
Lorenz Walthert
ABAndri Baltensweiler
Andri Baltensweiler

29 May 2018 in SOIL
Verified
Journal Article
Open access
PDF file
LGLucie Greiner
Lucie Greiner
MNMadlene Nussbaum
Madlene Nussbaum
APAndreas Papritz
Andreas Papritz
SZStephan Zimmermann
Stephan Zimmermann
AGAndreas Gubler
Andreas Gubler
AKArmin Keller
Armin Keller
Spatial information on soil function fulfillment (SFF) is increasingly being used to inform decision-making in spatial planning programs to support sustainable use of soil resources. Soil function maps visualize soils abilities to fulfill their functions, e.g., regulating water and nutrient flows, providing habitats, and supporting biomass production based on soil properties. Such information must be reliable for informed and transparent decision-making in spatial planning programs. In this study, we add to the transparency of soil function maps by (1) indicating uncertainties arising from the prediction of soil properties generated by digital soil mapping (DSM) that are used for soil function assessment (SFA) and (2) showing the response of different SFA methods to the propagation of uncertainties through the assessment. For a study area of 170 km2 in the Swiss Plateau, we map 10 static soil sub-functions for agricultural soils for a spatial resolution of 20 × 20 m together with their uncertainties. Mapping the 10 soil sub-functions using simple ordinal assessment scales reveals pronounced spatial patterns with a high variability of SFF scores across the region, linked to the inherent properties of the soils and terrain attributes and climate conditions. Uncertainties in soil properties propagated through SFA methods generally lead to substantial uncertainty in the mapped soil sub-functions. We propose two types of uncertainty maps that can be readily understood by stakeholders. Cumulative distribution functions of SFF scores indicate that SFA methods respond differently to the propagated uncertainty of soil properties. Even where methods are comparable on the level of complexity and assessment scale, their comparability in view of uncertainty propagation might be different. We conclude that comparable uncertainty indications in soil function maps are relevant to enable informed and transparent decisions on the sustainable use of soil resources.

6 February 2026 in Earth System Science Data
Verified
Journal Article
Open access
Tomislav HenglTomislav Hengl
Tomislav Hengl
DCDavide Consoli
Davide Consoli
XTXuemeng Tian
Xuemeng Tian
TNTravis W. Nauman
Travis W. Nauman
MNMadlene Nussbaum
Madlene Nussbaum
NHNancy Harris
Nancy Harris
There is increasing interest in global dynamic soil information with changes in soil properties mapped over time and at high spatial resolution. Thanks to long-term, multi-temporal, and fine- and medium-resolution satellite missions such as Landsat, MODIS, Copernicus Sentinel and similar, it is possible to produce globally consistent predictions of key soil variables that match other 10–30 m spatial resolution global data sets. This paper describes data preparation, modeling, and production of OpenLandMap-soildb: global dynamic predictions of soil organic carbon content, soil organic carbon density, bulk density, soil pH in H2O, soil texture fractions (clay, sand and silt) and USDA subgroup soil types (USDA soil taxonomy subgroups) at 30 m spatial resolution based on spatiotemporal Machine Learning (Quantile Regression Random Forest with output predictions showing the mean plus the 68 % probability lower and upper prediction intervals). To train the models, a large compilation of soil samples imported from legacy soil projects was used: 216 000 soil samples with soil carbon density (kg m−3), 408 000 soil samples with soil carbon content (g kg−1), 272 000 soil samples with soil pH in H2O, 363 000 soil samples with clay, silt and sand content (%) and 134 000 samples with bulk density oven dry (t m−3). Soil carbon and soil pH were mapped with 5-year time-intervals; soil texture fractions, bulk density, and soil types were mapped for recent years only. The cross-validation results indicate Root Mean Square Error (RMSE) of 17.7 (kg m−3; 0.486 in log-scale) and Concordance Correlation Coefficient (CCC) of 0.88 for SOC density, RMSE of 51.3 (g kg−1; 0.574 in log-scale) and CCC of 0.87 for SOC content, RMSE of 0.15 (t m−3) and CCC of 0.92 for bulk density of fine-earth, RMSE of 0.51 and CCC of 0.91 for soil pH, RMSE of 8.4 % and CCC of 0.87 for soil clay content, and RMSE of 12.6 % and CCC of 0.84 for soil sand content respectively. The most important variables for predicting soil organic carbon density (kg m−3) were: soil depth, Landsat-based uncalibrated Gross Primary Productivity (GPP), Normalized Difference Vegetation Index (NDVI) and CHELSA bioclimatic indices. The global distribution of soil pH can be primarily explained by the CHELSA Aridity Index (long-term), annual precipitation, and salinity grade. The global stocks for 2020–2022+ period for 0–30 cm depth interval are estimated at 461 Pg (Peta grams); the results further indicate that, in the last 25 years, the world has lost at least 11 Pg of SOC in the top soil. Suggestions are made on how to set up global permanent monitoring stations to accurately track land degradation and enable land restoration projects. The training data set is available at https://doi.org/10.5281/zenodo.4748499 (Hengl and Gupta, 2025), while the resulting data products can be accessed at https://doi.org/10.5281/zenodo.15470431 (Consoli et al., 2025) and https://world.soils.app (OpenGeoHub Foundation, 2026). Both datasets are released under a CC-BY license.