Iva Hafner Bratkovič

Dr. Iva Hafner Bratkovič

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Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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17 September 2021 in Science Advances
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Journal Article
Open access
ATANA TAPIA-ABELLAN
ANA TAPIA-ABELLAN
DBDiego Angosto Bazarra
Diego Angosto Bazarra
CACristina Alarcón-Vila
Cristina Alarcón-Vila
MBMaría C. Baños
María C. Baños
IBIva Hafner Bratkovič
Iva Hafner Bratkovič
PPPablo Pelegrín
Pablo Pelegrín
The specific NLRP3 N-terminal domain is essential for NLRP3 activation and inflammasome formation in response to K + efflux.

5 December 2018 in Nature Communications
Verified
Journal Article
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IBIva Hafner Bratkovič
Iva Hafner Bratkovič
PLPetra Sušjan Leite
Petra Sušjan Leite
DLDuško Lainšček
Duško Lainšček
ATAna Tapia-Abellán
Ana Tapia-Abellán
KCKosta Cerović
Kosta Cerović
RJRoman Jerala
Roman Jerala
NLRP3 is a cytosolic sensor triggered by different pathogen- and self-derived signals that plays a central role in a variety of pathological conditions, including sterile inflammation. The leucine-rich repeat domain is present in several innate immune receptors, where it is frequently responsible for sensing danger signals and regulation of activation. Here we show by reconstitution of truncated and chimeric variants intoNlrp3−/−macrophages that the leucine-rich repeat domain is dispensable for activation and self-regulation of NLRP3 by several different triggers. The pyrin domain on the other hand is required to maintain NLRP3 in the inactive conformation. A fully responsive minimal NLRP3 truncation variant reconstitutes peritonitis inNlrp3−/−mice. We demonstrate that in contrast to pathogen-activated NLRC4, the constitutively active NLRP3 molecule cannot engage wild-type NLRP3 molecules in a self-catalytic oligomerization. This lack of signal amplification is likely a protective mechanism to decrease sensitivity to endogenous triggers to impede autoinflammation.

19 January 2023 in Cell Reports
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Journal Article
Open access
PDPascal Devant
Pascal Devant
EBElvira Boršić
Elvira Boršić
ENElsy M. Ngwa
Elsy M. Ngwa
HXHaopeng Xiao
Haopeng Xiao
ECEdward T. Chouchani
Edward T. Chouchani
JKJonathan C. Kagan
Jonathan C. Kagan
Reactive oxygen species (ROS) regulate the activities of inflammasomes, which are innate immune signaling organelles that induce pyroptosis. The mechanisms by which ROS control inflammasome activities are unclear and may be multifaceted. Herein, we report that the protein gasdermin D (GSDMD), which forms membrane pores upon cleavage by inflammasome-associated caspases, is a direct target of ROS. Exogenous and endogenous sources of ROS, and ROS-inducing stimuli that prime cells for pyroptosis induction, promote oligomerization of cleaved GSDMD, leading to membrane rupture and cell death. We find that ROS enhance GSDMD activities through oxidative modification of cysteine 192 (C192). Within macrophages, GSDMD mutants lacking C192 show impaired ability to form membrane pores and induce pyroptosis. Reciprocal mutagenesis studies reveal that C192 is the only cysteine within GSDMD that mediates ROS responsiveness. Cellular redox state is therefore a key determinant of GSDMD activities.

18 May 2021 in The FASEB Journal
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Journal Article
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MMMateja Manček-Keber
Mateja Manček-Keber
IBIva Hafner Bratkovič
Iva Hafner Bratkovič
DLDuško Lainšček
Duško Lainšček
MBMojca Benčina
Mojca Benčina
TGTea Govednik
Tea Govednik
RJRoman Jerala
Roman Jerala
The SARS‐CoV‐2 pandemic imposed a large burden on health and society. Therapeutics targeting different components and processes of the viral infection replication cycle are being investigated, particularly to repurpose already approved drugs. Spike protein is an important target for both vaccines and therapeutics. Insights into the mechanisms of spike‐ACE2 binding and cell fusion could support the identification of compounds with inhibitory effects. Here, we demonstrate that the integrity of disulfide bonds within the receptor‐binding domain (RBD) plays an important role in the membrane fusion process although their disruption does not prevent binding of spike protein to ACE2. Several reducing agents and thiol‐reactive compounds are able to inhibit viral entry. N‐acetyl cysteine amide, L‐ascorbic acid, JTT‐705, and auranofin prevented syncytia formation, viral entry into cells, and infection in a mouse model, supporting disulfides of the RBD as a therapeutically relevant target.

15 January 2008 in Virology Journal
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Journal Article
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DDDarja Duh
Darja Duh
SNStuart T Nichol
Stuart T Nichol
MKMarina L Khristova
Marina L Khristova
ASAna Saksida
Ana Saksida
IBIva Hafner Bratkovič
Iva Hafner Bratkovič
TATatjana Avsic-Zupanc
Tatjana Avsic-Zupanc
The Balkan region and Kosovo in particular, is a well-known Crimean-Congo hemorrhagic fever (CCHF) endemic region, with frequent epidemic outbreaks and sporadic cases occurring with a hospitalized case fatality of approximately 30%. Recent analysis of complete genome sequences of diverse CCHF virus strains showed that the genome plasticity of the virus is surprisingly high for an arthropod-borne virus. High levels of nucleotide and amino acid differences, frequent RNA segment reassortment and even RNA recombination have been recently described. This diversity illustrates the need to determine the complete genome sequence of CCHF virus representatives of all geographically distinct endemic areas, particularly in light of the high pathogenicity of the virus and its listing as a potential bioterrorism threat. Here we describe the first complete CCHF virus genome sequence of a virus (strain Kosova Hoti) isolated from a hemorrhagic fever case in the Balkans. This virus strain was isolated from a fatal CCHF case, and passaged only twice on Vero E6 cells prior to sequence analysis. The virus total genome was found to be 19.2 kb in length, consisting of a 1672 nucleotide (nt) S segment, a 5364 nt M segment and a 12150 nt L segment. Phylogenetic analysis of CCHF virus complete genomes placed the Kosova Hoti strain in the Europe/Turkey group, with highest similarity seen with Russian isolates. The virus M segments are the most diverse with up to 31 and 27% differences seen at the nt and amino acid levels, and even 1.9% amino acid difference found between the Kosova Hoti and another strain from Kosovo (9553-01). This suggests that distinct virus strains can coexist in highly endemic areas.

30 December 2024 in Nature Communications
Verified
Journal Article
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SOSara Orehek
Sara Orehek
TRTaja Železnik Ramuta
Taja Železnik Ramuta
DLDuško Lainšček
Duško Lainšček
ŠMŠpela Malenšek
Špela Malenšek
MŠMartin Šala
Martin Šala
IBIva Hafner Bratkovič
Iva Hafner Bratkovič
Inflammasomes are defense complexes that utilize cytokines and immunogenic cell death (ICD) to stimulate the immune system against pathogens. Inspired by their dual action, we present cytokine-armed pyroptosis as a strategy for boosting immune response against diverse types of tumors. To induce pyroptosis, we utilize designed tightly regulated gasdermin D variants comprising different pore-forming capabilities and diverse modes of activation, representing a toolbox of ICD inducers. We demonstrate that the electrogenic transfer of ICD effector-encoding plasmids into mouse melanoma tumors when combined with intratumoral expression of cytokines IL-1β, IL-12, or IL-18, enhanced anti-tumor immune responses. Careful selection of immunostimulatory molecules is, however, imperative as a combination of IL-1β and IL-18 antagonized the protective effect of pyroptosis by IFNγ-mediated upregulation of several immunosuppressive pathways. Additionally, we show that the intratumoral introduction of armed pyroptosis provides protection against distant tumors and proves effective across various tumor types without inducing systemic inflammation. Deconstructed inflammasomes thus serve as a powerful, tunable, and tumor-agnostic strategy to enhance antitumor response, even against the most resilient types of tumors.