Marc Domènech

Mr. Marc Domènech

orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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20 October 2021 in Database: The Journal of Biological Databases and Curation
Verified
Journal Article
Open access
PDF file
SPStano Pekár
Stano Pekár
JWJonas Wolff
Jonas Wolff
ĽČĽudmila Černecká
Ľudmila Černecká
KBKlaus Birkhofer
Klaus Birkhofer
SMStefano Mammola
Stefano Mammola
PCPedro Cardoso
Pedro Cardoso
Spiders are a highly diversified group of arthropods and play an important role in terrestrial ecosystems as ubiquitous predators, which makes them a suitable group to test a variety of eco-evolutionary hypotheses. For this purpose, knowledge of a diverse range of species traits is required. Until now, data on spider traits have been scattered across thousands of publications produced for over two centuries and written in diverse languages. To facilitate access to such data, we developed an online database for archiving and accessing spider traits at a global scale. The database has been designed to accommodate a great variety of traits (e.g. ecological, behavioural and morphological) measured at individual, species or higher taxonomic levels. Records are accompanied by extensive metadata (e.g. location and method). The database is curated by an expert team, regularly updated and open to any user. A future goal of the growing database is to include all published and unpublished data on spider traits provided by experts worldwide and to facilitate broad cross-taxon assays in functional ecology and comparative biology.Database URL: https://spidertraits.sci.muni.cz/

29 November 2018 in Biodiversity Data Journal
Verified
Journal Article
Open access
LCLuís Crespo
Luís Crespo
MDMarc Domènech
Marc Domènech
AEAlba Enguídanos
Alba Enguídanos
JMJagoba Malumbres-Olarte
Jagoba Malumbres-Olarte
PCPedro Cardoso
Pedro Cardoso
MAMiquel Arnedo
Miquel Arnedo
A large scale semi-quantitative biodiversity assessment was conducted in white oak woodlands in areas included in the Spanish Network of National Parks, as part of a project aimed at revealing biogeographic patterns and identify biodiversity drivers. The semi-quantitative COBRA sampling protocol was conducted in sixteen 1-ha plots across six national parks using a nested design. All adult specimens were identified to species level based on morphology. Uncertain delimitations and identifications due to either limited information of diagnostic characters or conflicting taxonomy were further investigated using DNA barcode information.We identified 376 species belonging to 190 genera in 39 families, from the 8,521 adults found amongst the 20,539 collected specimens. Faunistic results include the discovery of 7 new species to the Iberian Peninsula, 3 new species to Spain and 11 putative new species to science. As largely expected by environmental features, the southern parks showed a higher proportion of Iberian and Mediterranean species than the northern parks, where the Palearctic elements were largely dominant. The analysis of approximately 3,200 DNA barcodes generated in the present study, corroborated and provided finer resolution to the morphologically based delimitation and identification of specimens in some taxonomically challenging families. Specifically, molecular data confirmed putative new species with diagnosable morphology, identified overlooked lineages that may constitute new species, confirmed assignment of specimens of unknown sexes to species and identified cases of misidentifications and phenotypic polymorphisms.

23 July 2020 in Diversity
Verified
Journal Article
Open access
PDF file
NMNuria Macías-Hernández
Nuria Macías-Hernández
MDMarc Domènech
Marc Domènech
PCPedro Cardoso
Pedro Cardoso
BEBrent C. Emerson
Brent C. Emerson
Paulo BorgesPaulo Borges
Paulo Borges
MAMiquel Arnedo
Miquel Arnedo
Phylogenetic relatedness is a key diversity measure for the analysis and understanding of how species and communities evolve across time and space. Understanding the nonrandom loss of species with respect to phylogeny is also essential for better-informed conservation decisions. However, several factors are known to influence phylogenetic reconstruction and, ultimately, phylogenetic diversity metrics. In this study, we empirically tested how some of these factors (topological constraint, taxon sampling, genetic markers and calibration) affect phylogenetic resolution and uncertainty. We built a densely sampled, species-level phylogenetic tree for spiders, combining Sanger sequencing of species from local communities of two biogeographical regions (Iberian Peninsula and Macaronesia) with a taxon-rich backbone matrix of Genbank sequences and a topological constraint derived from recent phylogenomic studies. The resulting tree constitutes the most complete spider phylogeny to date, both in terms of terminals and background information, and may serve as a standard reference for the analysis of phylogenetic diversity patterns at the community level. We then used this tree to investigate how partial data affect phylogenetic reconstruction, phylogenetic diversity estimates and their rankings, and, ultimately, the ecological processes inferred for each community. We found that the incorporation of a single slowly evolving marker (28S) to the DNA barcode sequences from local communities, had the highest impact on tree topology, closely followed by the use of a backbone matrix. The increase in missing data resulting from combining partial sequences from local communities only had a moderate impact on the resulting trees, similar to the difference observed when using topological constraints. Our study further revealed substantial differences in both the phylogenetic structure and diversity rankings of the analyzed communities estimated from the different phylogenetic treatments, especially when using non-ultrametric trees (phylograms) instead of time-stamped trees (chronograms). Finally, we provide some recommendations on reconstructing phylogenetic trees to infer phylogenetic diversity within ecological studies.

30 April 2020 in Biodiversity Data Journal
Verified
Journal Article
Open access
NMNuria Macías-Hernández
Nuria Macías-Hernández
CRCândida Ramos
Cândida Ramos
MDMarc Domènech
Marc Domènech
SFSara Febles
Sara Febles
ISIrene Santos
Irene Santos
PCPedro Cardoso
Pedro Cardoso
There is an increasing demand for databases including species trait information for biodiversity and community ecology studies. The existence of trait databases is useful for comparative studies within taxa or geographical regions, but there is low availability of databases for certain organisms. Here we present an open access functional trait database for spiders from Macaronesia and the Iberian Peninsula, recording several morphological and ecological traits related to the species life histories, microhabitat and trophic preferences.We present a database that includes 12 biological traits for 506 spider species present in natural forests of the Iberian Peninsula (Spain) and three Macaronesian archipelagoes (Azores, Madeira and Canary Islands). The functional trait database consists of two sections: individual-level data for six morphological traits (total body size, prosoma length, prosoma width, prosoma height, tibia I length and fang length), based on direct measurements of 2844 specimens of all spider species; and species-level aggregate data for 12 traits (same 6 morphological traits as in the previous section plus dispersal ability, vertical stratification, circadian activity, foraging strategy, trophic specialization and colonization status), based on either the average of the direct measurements or bibliographic searches. individual-level data for six morphological traits (total body size, prosoma length, prosoma width, prosoma height, tibia I length and fang length), based on direct measurements of 2844 specimens of all spider species; andspecies-level aggregate data for 12 traits (same 6 morphological traits as in the previous section plus dispersal ability, vertical stratification, circadian activity, foraging strategy, trophic specialization and colonization status), based on either the average of the direct measurements or bibliographic searches.This functional trait database will serve as a data standard for currently ongoing analyses that require trait and functional diversity statistics.

3 November 2019 in Journal of Biogeography
Verified
Journal Article
Closed access
PDF file
JCJosé C. Carvalho
José C. Carvalho
JMJagoba Malumbres-Olarte
Jagoba Malumbres-Olarte
MAMiquel Arnedo
Miquel Arnedo
LCLuís C. Crespo
Luís C. Crespo
MDMarc Domènech
Marc Domènech
PCPedro Cardoso
Pedro Cardoso

13 November 2021 in Insect Conservation and Diversity
Verified
Journal Article
Open access
PDF file
MDMarc Domènech
Marc Domènech
JMJagoba Malumbres-Olarte
Jagoba Malumbres-Olarte
AEAlba Enguídanos
Alba Enguídanos
CMCesc Múrria
Cesc Múrria
MAMiquel Arnedo
Miquel Arnedo
The current rate of species loss calls for immediate actions to preserve biodiversity and ecosystem functioning. Cataloguing species richness and composition, and revealing how diversity is geographically distributed are the first steps towards designing efficient conservation strategies. Here, we aim to determine diversity patterns and potential drivers of taxonomic and genetic diversity and population structure of Iberian spiders. We used a community level perspective, analysing more than 3000 DNA barcode sequences representing ~370 spider species dwelling in white‐oak forest habitats across the Spanish National Park network. By combining and comparing morphological and DNA barcode‐based species delimitation methods, we assessed their performance and identified putative factors behind cases of incongruence. Our findings uncovered potential overlooked diversity as suggested by the geographic patterns of genetic variation and put a red flag on those taxa that may be undergoing overlooked evolutionary or ecological processes. Spider functional traits associated with foraging strategy, microhabitat preference, ballooning ability and circadian activity explained the observed patterns of population structure across species but did not explain variation in genetic diversity. Overall, our study represents a major step forward in the understanding of large‐scale diversity patterns in Iberian spiders at the community level and provides relevant information to guide future conservation strategies of the so‐far largely overlooked invertebrate diversity.