Golnaz Karoubi

Dr. Golnaz Karoubi

Department of Mechanical and Industrial Engineering, University of Toronto, Toronto, Canada

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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19 August 2019 in Scientific Reports
Verified
Journal Article
Open access
PDF file
FAFabio Aoki
Fabio Aoki
RVRatna Varma
Ratna Varma
AMAlba E. Marin-Araujo
Alba E. Marin-Araujo
HLHankyu Lee
Hankyu Lee
JSJohn P. Soleas
John P. Soleas
Golnaz KaroubiGolnaz Karoubi
Golnaz Karoubi
Replacement of large tracheal defects remains an unmet clinical need. While recellularization of acellular tracheal grafts appeared to be a viable pathway, evidence from the clinic suggests otherwise. In hindsight, complete removal of chondrocytes and repopulation of the tracheal chondroid matrix to achieve functional tracheal cartilage may have been unrealistic. In contrast, the concept of a hybrid graft whereby the epithelium is removed and the immune-privileged cartilage is preserved is a radically different path with initial reports indicating potential clinical success. Here, we present a novel approach using a double-chamber bioreactor to de-epithelialize tracheal grafts and subsequently repopulate the grafts with exogenous cells. A 3 h treatment with sodium dodecyl sulfate perfused through the inner chamber efficiently removes the majority of the tracheal epithelium while the outer chamber, perfused with growth media, keeps most (68.6 ± 7.3%) of the chondrocyte population viable. De-epithelialized grafts support human bronchial epithelial cell (BEAS-2B) attachment, viability and growth over 7 days. While not without limitations, our approach suggests value in the ultimate use of a chimeric allograft with intact donor cartilage re-epithelialized with recipient-derived epithelium. By adopting a brief and partial decellularization approach, specifically removing the epithelium, we avoid the need for cartilage regeneration.

13 January 2021 in Scientific Reports
Verified
Journal Article
Open access
PDF file
HLHankyu Lee
Hankyu Lee
AMAlba E. Marin-Araujo
Alba E. Marin-Araujo
FAFabio G. Aoki
Fabio G. Aoki
SHSiba Haykal
Siba Haykal
TWThomas K. Waddell
Thomas K. Waddell
Golnaz KaroubiGolnaz Karoubi
Golnaz Karoubi
Successful re-epithelialization of de-epithelialized tracheal scaffolds remains a challenge for tracheal graft success. Currently, the lack of understanding of the bioreactor hydrodynamic environment, and its relation to cell seeding outcomes, serve as major obstacles to obtaining viable tracheal grafts. In this work, we used computational fluid dynamics to (a) re-design the fluid delivery system of a trachea bioreactor to promote a spatially uniform hydrodynamic environment, and (b) improve the perfusion cell seeding protocol to promote homogeneous cell deposition. Lagrangian particle-tracking simulations showed that low rates of rotation provide more uniform circumferential and longitudinal patterns of cell deposition, while higher rates of rotation only improve circumferential uniformity but bias cell deposition proximally. Validation experiments with human bronchial epithelial cells confirm that the model accurately predicts cell deposition in low shear stress environments. We used the acquired knowledge from our particle tracking model, as a guide for long-term tracheal repopulation studies. Cell repopulation using conditions resulting in low wall shear stress enabled enhanced re-epithelialization of long segment tracheal grafts. While our work focuses on tracheal regeneration, lessons learned in this study, can be applied to culturing of any tissue engineered tubular scaffold.

1 November 2018 in Acta Biomaterialia
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Journal Article
Closed access
RVRatna Varma
Ratna Varma
FAFabio Aoki
Fabio Aoki
KSKayla Soon
Kayla Soon
Golnaz KaroubiGolnaz Karoubi
Golnaz Karoubi
TWThomas K. Waddell
Thomas K. Waddell

26 September 2021 in Advanced Healthcare Materials
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Journal Article
Closed access
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RVRatna Varma
Ratna Varma
AMAlba E. Marin‐Araujo
Alba E. Marin‐Araujo
SRSara Rostami
Sara Rostami
TWThomas K. Waddell
Thomas K. Waddell
Golnaz KaroubiGolnaz Karoubi
Golnaz Karoubi
SHSiba Haykal
Siba Haykal

1 January 2021 in Tissue Engineering Part C: Methods
Verified
Journal Article
Closed access
MAMohammadali Ahmadipour
Mohammadali Ahmadipour
PDPascal Duchesneau
Pascal Duchesneau
DTDaisuike Taniguchi
Daisuike Taniguchi
TWThomas K. Waddell
Thomas K. Waddell
Golnaz KaroubiGolnaz Karoubi
Golnaz Karoubi
For end-stage lung disease, lung transplantation remains the only treatment but is limited by the availability of organs. Production of bioengineered lungs via recellularization is an alternative but is hindered by inadequate repopulation. We present a cell delivery method via the generation of negative pressure. Decellularized lungs were seeded with human bronchial epithelial cells using gravity-based perfusion or negative pressure (via air removal). After delivery, lungs were maintained in static conditions for 18 hrs, and cell surface coverage was qualitatively assessed using histology and analyzed by subjective scoring and an image analysis software. Negative pressure seeded lungs had higher cell surface coverage area, and this effect was maintained following five days of culture. Enhanced coverage via negative pressure cell delivery was also observed when vasculature seeded with endothelial cells. Our findings show that negative pressure cell delivery is a superior approach for the recellularization of the bioengineered lung.

Verified
Journal Article
Open access
PDF file
PDPascal Duchesneau
Pascal Duchesneau
TWThomas K. Waddell
Thomas K. Waddell
Golnaz KaroubiGolnaz Karoubi
Golnaz Karoubi
Cystic Fibrosis (CF) is a chronic autosomal recessive disease caused by defects in the cystic fibrosis transmembrane conductance regulator gene (CFTR). Cystic Fibrosis affects multiple organs but progressive remodeling of the airways, mucus accumulation, and chronic inflammation in the lung, result in lung disease as the major cause of morbidity and mortality. While advances in management of CF symptoms have increased the life expectancy of this devastating disease, and there is tremendous excitement about the potential of new agents targeting the CFTR molecule itself, there is still no curative treatment. With the recent advances in the identification of endogenous airway progenitor cells and in directed differentiation of pluripotent cell sources, cell-based therapeutic approaches for CF have become a plausible treatment method with the potential to ultimately cure the disease. In this review, we highlight the current state of cell therapy in the CF field focusing on the relevant autologous and allogeneic cell populations under investigation and the challenges associated with their use. In addition, we present advances in induced pluripotent stem (iPS) cell approaches and emerging new genetic engineering methods, which have the capacity to overcome the current limitations hindering cell therapy approaches.