Sarkar M.A. Kawsar

Prof. Dr. Sarkar M.A. Kawsar

Professaor Dept of Chemistry
orcid

Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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4 July 2023 in Journal of Biomolecular Structure and Dynamics
Verified
Journal Article
Closed access
SHSangar Ali Hassan
Sangar Ali Hassan
DADara Aziz
Dara Aziz
MAMedia Noori Abdullah
Media Noori Abdullah
ABAJMAL R BHAT
AJMAL R BHAT
RDRajendra S. Dongre
Rajendra S. Dongre
JJJoazaizulfazli Jamalis
Joazaizulfazli Jamalis
In this work, Schiff bases and Thiazolidin-4-ones, were synthesized using Sonication and Microwave techniques, respectively. The Schiff base derivatives (3a-b) were synthesized via the reaction of Sulfathiazole (1) with benzaldehyde derivatives (2a-b), followed by the synthesis of 4-thiazoledinone (4a-b) derivatives by cyclizing the synthesized Schiff bases through thioglycholic acid. All the synthesized compounds were characterized by spectroscopic techniques such as FT IR, NMR and HRMS. The synthesized compounds were tested for their in vitro antimicrobial and antioxidant and in vivo cytotoxicity and hemolysis ability. The synthesized compounds displayed better antimicrobial and antioxidant activity and low toxicity in comparison to reference drugs and negative controls, respectively. The hemolysis test revealed the compounds exhibit lower hemolytic effects and hemolytic values are comparatively low and the safety of compounds is in comparison with standard drugs. Theoretical calculations were carried out by using the molecular operating environment (MOE) and Gaussian computing software and observations were in good agreement with the in vitro and in vivo biological activities. Petra/Osiris/Molinspiration (POM) results indicate the presence of three combined antibacterial, antiviral and antitumor pharmacophore sites. The molecular docking revealed the significant binding affinities and non-bonding interactions between the compounds and Erwinia Chrysanthemi (PDB ID: 1SHK). The molecular dynamics simulation under in silico physiological conditions revealed a stable conformation and binding pattern in a stimulating environment. HighlightsNew series of Thaiazolidin-4-one derivatives have been synthesized.Sonication and microwave techniques are used.Antimicrobial, Antioxidant, cytotoxicity, and hemolysis activities were observed for all synthesized compounds.Molecular Docking and DFT/POM analyses have been predicted.Communicated by Ramaswamy H. Sarma.

1 December 2012 in Journal of Biological Chemistry
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Journal Article
Open access
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YFYuki Fujii
Yuki Fujii
NDNaoshi Dohmae
Naoshi Dohmae
KTKoji Takio
Koji Takio
Sarkar M.A. KawsarSarkar M.A. Kawsar
Sarkar M.A. Kawsar
RMRyo Matsumoto
Ryo Matsumoto
Yasuhiro OzekiYasuhiro Ozeki
Yasuhiro Ozeki
A novel lectin structure was found for a 17-kDa α-d-galactose-binding lectin (termed “MytiLec”) isolated from the Mediterranean mussel, Mytilus galloprovincialis. The complete primary structure of the lectin was determined by Edman degradation and mass spectrometric analysis. MytiLec was found to consist of 149 amino acids with a total molecular mass of 16,812.59 Da by Fourier transform-ion cyclotron resonance mass spectrometry, in good agreement with the calculated value of 16,823.22 Da. MytiLec had an N terminus of acetylthreonine and a primary structure that was highly novel in comparison with those of all known lectins in the structure database. The polypeptide structure consisted of three tandem-repeat domains of ∼50 amino acids each having 45–52% homology with each other. Frontal affinity chromatography technology indicated that MytiLec bound specifically to globotriose (Gb3; Galα1–4Galβ1–4Glc), the epitope of globotriaosylceramide. MytiLec showed a dose-dependent cytotoxic effect on human Burkitt lymphoma Raji cells (which have high surface expression of Gb3) but had no such effect on erythroleukemia K562 cells (which do not express Gb3). The cytotoxic effect of MytiLec was specifically blocked by the co-presence of an α-galactoside. MytiLec treatment of Raji cells caused increased binding of anti-annexin V antibody and incorporation of propidium iodide, which are indicators of cell membrane inversion and perforation. MytiLec is the first reported lectin having a primary structure with the highly novel triple tandem-repeat domain and showing transduction of apoptotic signaling against Burkitt lymphoma cells by interaction with a glycosphingolipid-enriched microdomain containing Gb3.

4 March 2022 in Journal of Molecular Structure
Verified
Journal Article
Closed access
SISajia Islam
Sajia Islam
Mohammed Anowar HosenMohammed Anowar Hosen
Mohammed Anowar Hosen
SASajjad Ahmad
Sajjad Ahmad
Muhammad Tahir ul QamarMuhammad Tahir ul Qamar
Muhammad Tahir ul Qamar
SDSujan Dey
Sujan Dey
Sarkar M.A. KawsarSarkar M.A. Kawsar
Sarkar M.A. Kawsar

7 March 2024 in Journal of Molecular Structure
Verified
Journal Article
Closed access
NANasrin Akter
Nasrin Akter
Bourougaa LotfiBourougaa Lotfi
Bourougaa Lotfi
MOMebarka Ouassaf
Mebarka Ouassaf
RBRipon C. Bhowmic
Ripon C. Bhowmic
KUKabir M. Uddin
Kabir M. Uddin
Sarkar M.A. KawsarSarkar M.A. Kawsar
Sarkar M.A. Kawsar

6 July 2021 in In Silico Pharmacology
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Journal Article
Closed access
KRKazi M. Rana
Kazi M. Rana
JMJannatul Maowa
Jannatul Maowa
AAAsraful Alam
Asraful Alam
SDSujan Dey
Sujan Dey
AHAnowar Hosen
Anowar Hosen
Sarkar M.A. KawsarSarkar M.A. Kawsar
Sarkar M.A. Kawsar

20 November 2021 in Molecules
Verified
Journal Article
Open access
PDF file
MAMd Ruhul Amin
Md Ruhul Amin
FYFarhana Yasmin
Farhana Yasmin
Mohammed Anowar HosenMohammed Anowar Hosen
Mohammed Anowar Hosen
SDSujan Dey
Sujan Dey
SMSahrif mahmud
Sahrif mahmud
Sarkar M.A. KawsarSarkar M.A. Kawsar
Sarkar M.A. Kawsar
A series of methyl β-D-galactopyranoside (MGP, 1) analogs were selectively acylated with cinnamoyl chloride in anhydrous N,N-dimethylformamide/triethylamine to yield 6-O-substitution products, which was subsequently converted into 2,3,4-tri-O-acyl analogs with different acyl halides. Analysis of the physicochemical, elemental, and spectroscopic data of these analogs revealed their chemical structures. In vitro antimicrobial testing against five bacteria and two fungi and the prediction of activity spectra for substances (PASS) showed promising antifungal functionality comparing to their antibacterial activities. Minimum inhibition concentration (MIC) and minimum bactericidal concentration (MBC) tests were conducted for four compounds (4, 5, 6, and 9) based on their activity. MTT assay showed low antiproliferative activity of compound 9 against Ehrlich’s ascites carcinoma (EAC) cells with an IC50 value of 2961.06 µg/mL. Density functional theory (DFT) was used to calculate the thermodynamic and physicochemical properties whereas molecular docking identified potential inhibitors of the SARS-CoV-2 main protease (6Y84). A 150-ns molecular dynamics simulation study revealed the stable conformation and binding patterns in a stimulating environment. In-silico ADMET study suggested all the designed molecules to be non-carcinogenic, with low aquatic and non-aquatic toxicity. In summary, all these antimicrobial, anticancer and in silico studies revealed that newly synthesized MGP analogs possess promising antiviral activity, to serve as a therapeutic target for COVID-19.