Samuel Hache

Dr. Samuel Hache

orcid

Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 May 2025 in Global Ecology and Biogeography
Verified
Journal Article
Open access
KDKevin F. A. Darras
Kevin F. A. Darras
RRRodney A. Rountree
Rodney A. Rountree
SWSteven L. Van Wilgenburg
Steven L. Van Wilgenburg
ACAnna Cord
Anna Cord
FPFrederik Pitz
Frederik Pitz
TWThomas Cherico Wanger
Thomas Cherico Wanger
Aim: The urgency for remote, reliable and scalable biodiversity monitoring amidst mounting human pressures on ecosystems has sparked worldwide interest in Passive Acoustic Monitoring (PAM), which can track life underwater and on land. However, we lack a unified methodology to report this sampling effort and a comprehensive overview of PAM coverage to gauge its potential as a global research and monitoring tool. To address this gap, we created the Worldwide Soundscapes project, a collaborative network and growing database comprising metadata from 416 datasets across all realms (terrestrial, marine, freshwater and subterranean).Location: Worldwide, 12,343 sites, all ecosystem types.Time Period: 1991 to present.Major Taxa Studied: All soniferous taxa.Methods: We synthesise sampling coverage across spatial, temporal and ecological scales using metadata describing sampling locations, deployment schedules, focal taxa and audio recording parameters. We explore global trends in biological, anthropogenic and geophysical sounds based on 168 selected recordings from 12 ecosystems across all realms.Results: Terrestrial sampling is spatially denser (46 sites per million square kilometre—Mkm2) than aquatic sampling (0.3 and 1.8 sites/Mkm2 in oceans and fresh water) with only two subterranean datasets. Although diel and lunar cycles are well sampled across realms, only marine datasets (55%) comprehensively sample all seasons. Across the 12 ecosystems selected for exploring global acoustic trends, biological sounds showed contrasting diel patterns across ecosystems, declined with distance from the Equator, and were negatively correlated with anthropogenic sounds.Main Conclusions: PAM can inform macroecological studies as well as global conservation and phenology syntheses, but representation can be improved by expanding terrestrial taxonomic scope, sampling coverage in the high seas and subterranean ecosystems, and spatio‐temporal replication in freshwater habitats. Overall, this worldwide PAM network holds promise to support cross‐realm biodiversity research and monitoring efforts.

22 March 2022 in Ecology Letters
Verified
Journal Article
Open access
EMEliot J. B. McIntire
Eliot J. B. McIntire
ACAlex M. Chubaty
Alex M. Chubaty
SCSteven G. Cumming
Steven G. Cumming
DADave Andison
Dave Andison
CBCeres Barros
Ceres Barros
FSFrances E. C. Stewart
Frances E. C. Stewart
Making predictions from ecological models—and comparing them to data—offers a coherent approach to evaluate model quality, regardless of model complexity or modelling paradigm. To date, our ability to use predictions for developing, validating, updating, integrating and applying models across scientific disciplines while influencing management decisions, policies, and the public has been hampered by disparate perspectives on prediction and inadequately integrated approaches. We present an updated foundation for Predictive Ecology based on seven principles applied to ecological modelling: make frequent Predictions, Evaluate models, make models Reusable, Freely accessible and Interoperable, built within Continuous workflows that are routinely Tested (PERFICT). We outline some benefits of working with these principles: accelerating science; linking with data science; and improving science‐policy integration.

1 January 2016 in Avian Conservation and Ecology
Verified
Journal Article
Open access
PDF file
JBJeffrey R. Ball
Jeffrey R. Ball
PSPéter Sólymos
Péter Sólymos
FSFiona K. A. Schmiegelow
Fiona K. A. Schmiegelow
SHSamuel Hache
Samuel Hache
JSJim Schieck
Jim Schieck
EBErin Bayne
Erin Bayne
Ball, J. R., P. Sólymos, F. K. A. Schmiegelow, S. Hache, J. Schieck, and E. Bayne. 2016. Regional habitat needs of a nationally listed species, Canada Warbler (Cardellina canadensis), in Alberta, Canada. Avian Conservation and Ecology 11(2):10.http://dx.doi.org/10.5751/ACE-00916-110210

16 June 2020 in PLOS ONE
Verified
Journal Article
Open access
PDF file
SWSteven L. Van Wilgenburg
Steven L. Van Wilgenburg
CMC. Lisa Mahon
C. Lisa Mahon
GCGreg Campbell
Greg Campbell
LMLogan McLeod
Logan McLeod
MCMargaret Campbell
Margaret Campbell
Junior A. TremblayJunior A. Tremblay
Junior A. Tremblay
Predicting and mitigating impacts of climate change and development within the boreal biome requires a sound understanding of factors influencing the abundance, distribution, and population dynamics of species inhabiting this vast biome. Unfortunately, the limited accessibility of the boreal biome has resulted in sparse and spatially biased sampling, and thus our understanding of boreal bird population dynamics is limited. To implement effective conservation of boreal birds, a cost-effective approach to sampling the boreal biome will be needed. Our objective was to devise a sampling scheme for monitoring boreal birds that would improve our ability to model species-habitat relationships and monitor changes in population size and distribution. A statistically rigorous design to achieve these objectives would have to be spatially balanced and hierarchically structured with respect to ecozones, ecoregions and political jurisdictions. Therefore, we developed a multi-stage hierarchically structured sampling design known as the Boreal Optimal Sampling Strategy (BOSS) that included cost constraints, habitat stratification, and optimization to provide a cost-effective alternative to other common monitoring designs. Our design provided similar habitat and spatial representation to habitat stratification and equal-probability spatially balanced designs, respectively. Not only was our design able to achieve the desired habitat representation and spatial balance necessary to meet our objectives, it was also significantly less expensive (1.3−2.6 times less) than the alternative designs we considered. To further balance trade-offs between cost and representativeness prior to field implementation, we ran multiple iterations of the BOSS design and selected the one which minimized predicted costs while maximizing a multi-criteria evaluation of representativeness. Field implementation of the design in three vastly different regions over three field seasons showed that the approach can be implemented in a wide variety of logistical scenarios and ecological conditions. We provide worked examples and scripts to allow our approach to be implemented or adapted elsewhere. We also provide recommendations for possible future refinements to our approach, but recommend that our design now be implemented to provide unbiased information to assess the status of boreal birds and inform conservation and management actions.

28 November 2023 in Molecular Ecology
Verified
Journal Article
Open access
CMCaitlin V. Miller
Caitlin V. Miller
CBChristen M. Bossu
Christen M. Bossu
JSJames F. Saracco
James F. Saracco
DTDavid P. L. Toews
David P. L. Toews
CRClark S. Rushing
Clark S. Rushing
KRKristen C. Ruegg
Kristen C. Ruegg
Identifying genetic conservation units (CUs) in threatened species is critical for the preservation of adaptive capacity and evolutionary potential in the face of climate change. However, delineating CUs in highly mobile species remains a challenge due to high rates of gene flow and genetic signatures of isolation by distance. Even when CUs are delineated in highly mobile species, the CUs often lack key biological information about what populations have the most conservation need to guide management decisions. Here we implement a framework for CU identification in the Canada Warbler (Cardellina canadensis), a migratory bird species of conservation concern, and then integrate demographic modelling and genomic offset to guide conservation decisions. We find that patterns of whole genome genetic variation in this highly mobile species are primarily driven by putative adaptive variation. Identification of CUs across the breeding range revealed that Canada Warblers fall into two evolutionarily significant units (ESU), and three putative adaptive units (AUs) in the South, East, and Northwest. Quantification of genomic offset, a metric of genetic changes necessary to maintain current gene–environment relationships, revealed significant spatial variation in climate vulnerability, with the Northwestern AU being identified as the most vulnerable to future climate change. Alternatively, quantification of past population trends within each AU revealed the steepest population declines have occurred within the Eastern AU. Overall, we illustrate that genomics‐informed CUs provide a strong foundation for identifying current and future regional threats that can be used to inform management strategies for a highly mobile species in a rapidly changing world.

28 June 2017 in Ecology and Evolution
Verified
Journal Article
Open access
PDF file
SHSamuel Hache
Samuel Hache
EBErin Bayne
Erin Bayne
MVMarc‐André Villard
Marc‐André Villard
HPHeather Proctor
Heather Proctor
CDCorey S. Davis
Corey S. Davis
RKRichard Krikun
Richard Krikun
The objectives of this study were to describe and evaluate potential drivers of genetic structure in Canadian breeding populations of the Ovenbird, Seiurus aurocapilla. We performed genetic analyses on feather samples of individuals from six study sites using nuclear microsatellites. We also assessed species identity and population genetic structure of quill mites (Acariformes, Syringophilidae). For male Ovenbirds breeding in three study sites, we collected light‐level geolocator data to document migratory paths and identify the wintering grounds. We also generated paleohindcast projections from bioclimatic models of Ovenbird distribution to identify potential refugia during the last glacial maximum (LGM, 21,000 years before present) as a factor explaining population genetic structure. Birds breeding in the Cypress Hills (Alberta/Saskatchewan) may be considered a distinct genetic unit, but there was no evidence for genetic differentiation among any other populations. We found relatively strong migratory connectivity in both western and eastern populations, but some evidence of mixing among populations on the wintering grounds. There was also little genetic variation among syringophilid mites from the different Ovenbird populations. These results are consistent with paleohindcast distribution predictions derived from two different global climate models indicating a continuous single LGM refugium, with the possibility of two refugia. Our results suggest that Ovenbird populations breeding in boreal and hemiboreal regions are panmictic, whereas the population breeding in Cypress Hills should be considered a distinct management unit.