Joanna Kovalski

Dr. Joanna Kovalski

orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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22 March 2022 in The EMBO Journal
Verified
Journal Article
Closed access
JKJoanna Kovalski
Joanna Kovalski
DKDuygu Kuzuoglu‐Ozturk
Duygu Kuzuoglu‐Ozturk
DRDavide Ruggero
Davide Ruggero

10 October 2023 in Nature Communications
Verified
Journal Article
Open access
PDF file
IMIrati Macaya
Irati Macaya
MRMarta Roman
Marta Roman
CWConnor Welch
Connor Welch
RERodrigo Entrialgo-Cadierno
Rodrigo Entrialgo-Cadierno
MSMarina Salmon
Marina Salmon
SVSilvestre Vicent
Silvestre Vicent
Drug combinations are key to circumvent resistance mechanisms compromising response to single anti-cancer targeted therapies. The implementation of combinatorial approaches involving MEK1/2 or KRASG12C inhibitors in the context of KRAS-mutated lung cancers focuses fundamentally on targeting KRAS proximal activators or effectors. However, the antitumor effect is highly determined by compensatory mechanisms arising in defined cell types or tumor subgroups. A potential strategy to find drug combinations targeting a larger fraction of KRAS-mutated lung cancers may capitalize on the common, distal gene expression output elicited by oncogenic KRAS. By integrating a signature-driven drug repurposing approach with a pairwise pharmacological screen, here we show synergistic drug combinations consisting of multi-tyrosine kinase PKC inhibitors together with MEK1/2 or KRASG12C inhibitors. Such combinations elicit a cytotoxic response in both in vitro and in vivo models, which in part involves inhibition of the PKC inhibitor target AURKB. Proteome profiling links dysregulation of MYC expression to the effect of both PKC inhibitor-based drug combinations. Furthermore, MYC overexpression appears as a resistance mechanism to MEK1/2 and KRASG12C inhibitors. Our study provides a rational framework for selecting drugs entering combinatorial strategies and unveils MEK1/2- and KRASG12C-based therapies for lung cancer.

4 February 2025 in Nature Cell Biology
Verified
Journal Article
Closed access
PDF file
JKJoanna Kovalski
Joanna Kovalski
GSGoksu Sarioglu
Goksu Sarioglu
VSVishvak Subramanyam
Vishvak Subramanyam
GHGrace Hernandez
Grace Hernandez
GRGilles Rademaker
Gilles Rademaker
DRDavide Ruggero
Davide Ruggero

20 March 2025 in Nature Cell Biology
Verified
Journal Article
Closed access
PDF file
JKJoanna Kovalski
Joanna Kovalski
DRDavide Ruggero
Davide Ruggero

22 May 2021
Verified
Book Chapter
Closed access
PDF file
JKJoanna Kovalski
Joanna Kovalski
YXYichen Xu
Yichen Xu
DRDavide Ruggero
Davide Ruggero

16 July 2025 in bioRxiv
Verified
Preprint
Open access
SWSiyi Wang
Siyi Wang
JKJoanna Kovalski
Joanna Kovalski
FZFrancisco J. Zapatero-Belinchón
Francisco J. Zapatero-Belinchón
MBMaxwell Bennett
Maxwell Bennett
DKDuygu Kuzuoglu-Öztürk
Duygu Kuzuoglu-Öztürk
KSKevan M. Shokat
Kevan M. Shokat
Selective inhibition of mRNA translation is a promising strategy for modulating the activity of disease-associated genes, yet achieving both high potency and specificity remains challenging. Rocaglamide A (RocA), a molecular glue, inhibits translation by clamping eIF4A onto polypurine motifs found in many transcripts, thereby limiting RocA’s specificity. Here, we developed RocASO, a chemical conjugate that links RocA to an antisense oligonucleotide (ASO) capable of base-pairing with defined mRNA sequences, thus directing RocA’s clamping mechanism to chosen targets and enhancing overall potency and specificity. We show that RocASOs are compatible with various types of ASO modalities, including gapmers that induce the degradation of target RNAs. RocASOs were designed to effectively knock down endogenous genes ( PTGES3 , HSPA1B ) and SARS-CoV-2 viral RNA, the latter conferring potent antiviral activity in cells. These findings establish RocASO as a versatile platform for programmable translational inhibition with therapeutic potential.