Observing the environment in the vast regions of Earth through remote sensing platforms provides the tools to measure ecological dynamics. The Arctic tundra biome, one of the largest inaccessible terrestrial biomes on Earth, requires remote sensing across multiple spatial and temporal scales, from towers to satellites, particularly those equipped for imaging spectroscopy (IS). We describe a rationale for using IS derived from advances in our understanding of Arctic tundra vegetation communities and their interaction with the environment. To best leverage ongoing and forthcoming IS resources, including National Aeronautics and Space Administration’s Surface Biology and Geology mission, we identify a series of opportunities and challenges based on intrinsic spectral dimensionality analysis and a review of current data and literature that illustrates the unique attributes of the Arctic tundra biome. These opportunities and challenges include thematic vegetation mapping, complicated by low‐stature plants and very fine‐scale surface composition heterogeneity; development of scalable algorithms for retrieval of canopy and leaf traits; nuanced variation in vegetation growth and composition that complicates detection of long‐term trends; and rapid phenological changes across brief growing seasons that may go undetected due to low revisit frequency or be obscured by snow cover and clouds. We recommend improvements to future field campaigns and satellite missions, advocating for research that combines multi‐scale spectroscopy, from lab studies to satellites that enable frequent and continuous long‐term monitoring, to inform statistical and biophysical approaches to model vegetation dynamics.
7 July 2021 in Remote Sensing in Ecology and Conservation
Non‐forest ecosystems, dominated by shrubs, grasses and herbaceous plants, provide ecosystem services including carbon sequestration and forage for grazing, and are highly sensitive to climatic changes. Yet these ecosystems are poorly represented in remotely sensed biomass products and are undersampled by in situ monitoring. Current global change threats emphasize the need for new tools to capture biomass change in non‐forest ecosystems at appropriate scales. Here we developed and deployed a new protocol for photogrammetric height using unoccupied aerial vehicle (UAV) images to test its capability for delivering standardized measurements of biomass across a globally distributed field experiment. We assessed whether canopy height inferred from UAV photogrammetry allows the prediction of aboveground biomass (AGB) across low‐stature plant species by conducting 38 photogrammetric surveys over 741 harvested plots to sample 50 species. We found mean canopy height was strongly predictive of AGB across species, with a median adjusted R2 of 0.87 (ranging from 0.46 to 0.99) and median prediction error from leave‐one‐out cross‐validation of 3.9%. Biomass per‐unit‐of‐height was similar within but different among, plant functional types. We found that photogrammetric reconstructions of canopy height were sensitive to wind speed but not sun elevation during surveys. We demonstrated that our photogrammetric approach produced generalizable measurements across growth forms and environmental settings and yielded accuracies as good as those obtained from in situ approaches. We demonstrate that using a standardized approach for UAV photogrammetry can deliver accurate AGB estimates across a wide range of dynamic and heterogeneous ecosystems. Many academic and land management institutions have the technical capacity to deploy these approaches over extents of 1–10 ha−1. Photogrammetric approaches could provide much‐needed information required to calibrate and validate the vegetation models and satellite‐derived biomass products that are essential to understand vulnerable and understudied non‐forested ecosystems around the globe.
Precise coastal shoreline mapping is essential for monitoring changes in erosion rates, surface hydrology, and ecosystem structure and function. Monitoring water bodies in the Arctic National Wildlife Refuge (ANWR) is of high importance, especially considering the potential for oil and natural gas exploration in the region. In this work, we propose a modified variant of the Deep Neural Network based U-Net Architecture for the automated mapping of 4 Band Orthorectified NOAA Airborne Imagery using sparsely labeled training data and compare it to the performance of traditional Machine Learning (ML) based approaches—namely, random forest, xgboost—and spectral water indices—Normalized Difference Water Index (NDWI), and Normalized Difference Surface Water Index (NDSWI)—to support shoreline mapping of Arctic coastlines. We conclude that it is possible to modify the U-Net model to accept sparse labels as input and the results are comparable to other ML methods (an Intersection-over-Union (IoU) of 94.86% using U-Net vs. an IoU of 95.05% using the best performing method).
The Arctic is experiencing rapid climate change. This research documents changes to tundra vegetation near Atqasuk and Utqiaġvik, Alaska. At each location, 30 plots were sampled annually from 2010 to 2019 using a point frame. For every encounter, we recorded the height and classified it into eight groupings (deciduous shrubs, evergreen shrubs, forbs, graminoids, bryophytes, lichens, litter, and standing dead vegetation); for vascular plants we also identified the species. We found an increase in plant stature and cover over time, consistent with regional warming. Graminoid cover and height increased at both sites, with a 5-fold increase in cover in Atqasuk. At Atqasuk, the cover and height of shrubs and forbs increased. Species diversity decreased at both the sites. Year was generally the strongest predictor of vegetation change, suggesting a cumulative change over time; however, soil moisture and soil temperature were also predictors of vegetation change. We anticipate that plants in the region will continue to grow taller as the region warms, resulting in greater plant cover, especially of graminoids and shrubs. The increase in plant cover and accumulation of litter may negatively impact non-vascular plants. Continued changes in community structure will impact energy balance and carbon cycling and may have regional and global consequences.
Foundation species have disproportionately large impacts on ecosystem structure and function. As a result, future changes to their distribution may be important determinants of ecosystem carbon (C) cycling in a warmer world. We assessed the role of a foundation tussock sedge (Eriophorum vaginatum) as a climatically vulnerable C stock using field data, a machine learning ecological niche model, and an ensemble of terrestrial biosphere models (TBMs). Field data indicated that tussock density has decreased by ∼0.97 tussocks per m2 over the past ∼38 years on Alaska’s North Slope from ∼1981 to 2019. This declining trend is concerning because tussocks are a large Arctic C stock, which enhances soil organic layer C stocks by 6.9% on average and represents 745 Tg C across our study area. By 2100, we project that changes in tussock density may decrease the tussock C stock by 41% in regions where tussocks are currently abundant (e.g. −0.8 tussocks per m2 and −85 Tg C on the North Slope) and may increase the tussock C stock by 46% in regions where tussocks are currently scarce (e.g. +0.9 tussocks per m2 and +81 Tg C on Victoria Island). These climate-induced changes to the tussock C stock were comparable to, but sometimes opposite in sign, to vegetation C stock changes predicted by an ensemble of TBMs. Our results illustrate the important role of tussocks as a foundation species in determining future Arctic C stocks and highlight the need for better representation of this species in TBMs.
The species – area relationship (SAR) is a common pattern in which diversity increases with the area sampled, but ecosystems are three‐dimensional (3D) and diversity – volume relationships (DVRs) may exist in ecosystems that vary substantially in their vegetation volume. We tested whether forest vegetation volume, as a 3D extension of area in SARs, was a significant predictor of taxonomic (species) and structural (arrangement) diversity in five groups of organisms across the National Ecological Observatory Network (NEON). Vegetation volume and four structural arrangement metrics within the area of NEON plots were measured using NEON's discrete return lidar. Species richness was measured as the number of species within the respective NEON plot sampling area for understory plants, trees, breeding land birds, small mammals, and ground beetles. We found that volume negatively predicted understory plants and positively predicted tree and beetle species richness across the USA forest macrosystem, but not bird and small mammal species richness. Furthermore, volume was a significant predictor of several metrics that describe the internal and external heterogeneity of vegetation in forests (structural arrangement) within the ecosystem across the USA forest macrosystem. There were several significant within site‐level relationships, but not at all sites, between volume and species richness or structural arrangement in organism groups. Our study indicates that previous work that has focused on a 2D conceptualization of habitat can be expanded to 3D habitat space, but that the strength and the positive or negative direction of DVRs may vary taxonomically or geographically.