Fatima AlZahra'a Alatraktchi

Dr. Fatima AlZahra'a Alatraktchi

Department of Science and Environment, Roskilde University, Roskilde, Denmark
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Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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8 January 2021 in Sensors
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Journal Article
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Biljana MojsoskaBiljana Mojsoska
Biljana Mojsoska
SLSylvester Larsen
Sylvester Larsen
DODorte Aalund Olsen
Dorte Aalund Olsen
JMJonna Madsen
Jonna Madsen
IBIvan Brandslund
Ivan Brandslund
FAFatima AlZahra'a Alatraktchi
Fatima AlZahra'a Alatraktchi
The outbreak of the coronavirus disease (COVID-19) pandemic caused by the novel coronavirus (SARS-CoV-2) has been declared an international public health crisis. It is essential to develop diagnostic tests that can quickly identify infected individuals to limit the spread of the virus and assign treatment options. Herein, we report a proof-of-concept label-free electrochemical immunoassay for the rapid detection of SARS-CoV-2 virus via the spike surface protein. The assay consists of a graphene working electrode functionalized with anti-spike antibodies. The concept of the immunosensor is to detect the signal perturbation obtained from ferri/ferrocyanide measurements after binding of the antigen during 45 min of incubation with a sample. The absolute change in the [Fe(CN)6]3−/4− current upon increasing antigen concentrations on the immunosensor surface was used to determine the detection range of the spike protein. The sensor was able to detect a specific signal above 260 nM (20 µg/mL) of subunit 1 of recombinant spike protein. Additionally, it was able to detect SARS-CoV-2 at a concentration of 5.5 × 105 PFU/mL, which is within the physiologically relevant concentration range. The novel immunosensor has a significantly faster analysis time than the standard qPCR and is operated by a portable device which can enable on-site diagnosis of infection.


19 March 2016 in Sensors
Verified
Journal Article
Open access
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FAFatima AlZahra'a Alatraktchi
Fatima AlZahra'a Alatraktchi
SASandra Breum Andersen
Sandra Breum Andersen
HJHelle Krogh Johansen
Helle Krogh Johansen
SMSoren Molin
Soren Molin
WSWinnie Svendsen
Winnie Svendsen
Pyocyanin is a virulence factor uniquely produced by the pathogen Pseudomonas aeruginosa. The fast and selective detection of pyocyanin in clinical samples can reveal important information about the presence of this microorganism in patients. Electrochemical sensing of the redox-active pyocyanin is a route to directly quantify pyocyanin in real time and in situ in hospitals and clinics. The selective quantification of pyocyanin is, however, limited by other redox-active compounds existing in human fluids and by other metabolites produced by pathogenic bacteria. Here we present a direct selective method to detect pyocyanin in a complex electroactive environment using commercially available electrodes. It is shown that cyclic voltammetry measurements between −1.0 V to 1.0 V reveal a potential detection window of pyocyanin of 0.58–0.82 V that is unaffected by other redox-active interferents. The linear quantification of pyocyanin has an R2 value of 0.991 across the clinically relevant concentration range of 2–100 µM. The proposed method was tested on human saliva showing a standard deviation of 2.5% ± 1% (n = 5) from the known added pyocyanin concentration to the samples. This inexpensive procedure is suggested for clinical use in monitoring the presence and state of P. aeruginosa infection in patients.

13 September 2020 in Sensors
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Journal Article
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FAFatima AlZahra'a Alatraktchi
Fatima AlZahra'a Alatraktchi
WSWinnie Svendsen
Winnie Svendsen
SMSoren Molin
Soren Molin
Pseudomonas aeruginosa (PA) is a pathogen that is recognized for its advanced antibiotic resistance and its association with serious diseases such as ventilator-associated pneumonia and cystic fibrosis. The ability to rapidly detect the presence of pathogenic bacteria in patient samples is crucial for the immediate eradication of the infection. Pyocyanin is one of PA’s virulence factors used to establish infections. Pyocyanin promotes virulence by interfering in numerous cellular functions in host cells due to its redox-activity. Fortunately, the redox-active nature of pyocyanin makes it ideal for detection with simple electrochemical techniques without sample pretreatment or sensor functionalization. The previous decade has seen an increased interest in the electrochemical detection of pyocyanin either as an indicator of the presence of PA in samples or as a tool for quantifying PA virulence. This review provides the first overview of the advances in electrochemical detection of pyocyanin and offers an input regarding the future directions in the field.

13 September 2016 in Environmental Science & Technology
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Journal Article
Closed access
SSSara N. Sørensen
Sara N. Sørensen
CEChristian Engelbrekt
Christian Engelbrekt
HLHans-Christian H. Lützhøft
Hans-Christian H. Lützhøft
JJJavier Jiménez-Lamana
Javier Jiménez-Lamana
JNJafar Safaa Noori
Jafar Safaa Noori
ABAnders Baun
Anders Baun

22 March 2018 in PLOS ONE
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Journal Article
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FAFatima AlZahra'a Alatraktchi
Fatima AlZahra'a Alatraktchi
JNJafar Safaa Noori
Jafar Safaa Noori
GTGeorgi Plamenov Tanev
Georgi Plamenov Tanev
JMJohn Mortensen
John Mortensen
MDMaria Dimaki
Maria Dimaki
WSWinnie E Svendsen
Winnie E Svendsen
Pyocyanin is a toxin produced by Pseudomonas aeruginosa. Here we describe a novel paper-based electrochemical sensor for pyocyanin detection, manufactured with a simple and inexpensive approach based on electrode printing on paper. The resulting sensors constitute an effective electrochemical method to quantify pyocyanin in bacterial cultures without the conventional time consuming pretreatment of the samples. The electrochemical properties of the paper-based sensors were evaluated by ferri/ferrocyanide as a redox mediator, and showed reliable sensing performance. The paper-based sensors readily allow for the determination of pyocyanin in bacterial cultures with high reproducibility, achieving a limit of detection of 95 nM and a sensitivity of 4.30 μA/μM in standard culture media. Compared to the similar commercial ceramic based sensors, it is a 2.3-fold enhanced performance. The simple in-house fabrication of sensors for pyocyanin quantification allows researchers to understand in vitro adaptation of P. aeruginosa infections via rapid screenings of bacterial cultures that otherwise are expensive and time-consuming.