Benedikt Martin

Benedikt Martin


Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
6 April 2018 in Virchows Archiv
Verified
Journal Article
Closed access
PDF file
BMBenedikt Martin
Benedikt Martin
ESEva Schäfer
Eva Schäfer
EJElzbieta Jakubowicz
Elzbieta Jakubowicz
PMPatrick Mayr
Patrick Mayr
RIRegina Ihringer
Regina Ihringer
BMBruno Märkl
Bruno Märkl

10 July 2020 in Virchows Archiv
Verified
Journal Article
Open access
PDF file
JWJohanna Waidhauser
Johanna Waidhauser
BMBenedikt Martin
Benedikt Martin
MTMartin Trepel
Martin Trepel
Bruno MärklBruno Märkl
Bruno Märkl
Ever declining autopsy rates have been a concern of pathologists as well as clinicians for decades. Notably, in the field of oncology, data on autopsies and discrepancies between clinical and autoptic diagnoses are particularly scarce. In this retrospective study, we show the effect of a simple catalog of measures consisting of a different approach to obtain consent for autopsy, structured conferencing, and systematic teaching of residents, as well as a close collaboration between clinicians and pathologists on the numbers of autopsies, especially of oncological patients. Additionally, postmortem examination protocols from the years 2015 until 2019 were analyzed, regarding rates of discrepancies between clinical and autoptic causes of death in this category of patients. Autopsy numbers could be significantly increased from a minimum in 2014 (60 autopsies) to a maximum in 2018 (142 autopsies) (p < 0.0001). In the 67 autopsies of oncological cases, a high rate of 51% of major discrepancy between clinical and autoptic causes of death could be detected. In contrast to the general reported decline of autopsy rates, we present rising autopsy numbers over the past 5 years with an increasing number of oncological cases who underwent a postmortem examination. The high percentage of major discrepancies between clinical and autopsy diagnosis is in contrast to an expected decrease of major discrepancies in times of precise diagnostic methods and underlines the importance of autopsies to ensure high quality in diagnostics and therapy not only in the field of oncology.

25 April 2021 in Cancers
Verified
Journal Article
Open access
PDF file
SSStefan Schiele
Stefan Schiele
TATim Tobias Arndt
Tim Tobias Arndt
BMBenedikt Martin
Benedikt Martin
SMSilvia Miller
Silvia Miller
SBSvenja Bauer
Svenja Bauer
GMGernot Müller
Gernot Müller
In this study, we developed the Binary ImaGe Colon Metastasis classifier (BIg-CoMet), a semi-guided approach for the stratification of colon cancer patients into two risk groups for the occurrence of distant metastasis, using an InceptionResNetV2-based deep learning model trained on binary images. We enrolled 291 colon cancer patients with pT3 and pT4 adenocarcinomas and converted one cytokeratin-stained representative tumor section per case into a binary image. Image augmentation and dropout layers were incorporated to avoid overfitting. In a validation collective (n = 128), BIg-CoMet was able to discriminate well between patients with and without metastasis (AUC: 0.842, 95% CI: 0.774–0.911). Further, the Kaplan–Meier curves of the metastasis-free survival showed a highly significant worse clinical course for the high-risk group (log-rank test: p < 0.001), and we demonstrated superiority over other established risk factors. A multivariable Cox regression analysis adjusted for confounders supported the use of risk groups as a prognostic factor for the occurrence of metastasis (hazard ratio (HR): 5.4, 95% CI: 2.5–11.7, p < 0.001). BIg-CoMet achieved good performance for both UICC subgroups, especially for UICC III (n = 53), with a positive predictive value of 80%. Our study demonstrates the ability to stratify colon cancer patients via a semi-guided process on images that primarily reflect tumor architecture.

19 February 2020 in Virchows Archiv
Verified
Journal Article
Open access
PDF file
BMBenedikt Martin
Benedikt Martin
BBBettina Monika Banner
Bettina Monika Banner
ESEva-Maria Schäfer
Eva-Maria Schäfer
PMPatrick Mayr
Patrick Mayr
MAMatthias Anthuber
Matthias Anthuber
BMBruno Märkl
Bruno Märkl
The tumor stroma ratio (TSR) is a promising prognostic biomarker in colon cancer, which could provide additional risk stratification for therapy adaption. The objective of our study was the investigation of the prognostic significance of TSR at different tumor sites in a simple semiautomatic approach with the open-source program ImageJ. We investigated 206 pT3 and pT4 adenocarcinomas of no special type. According to our established thresholds, 31 tumors (15%) were classified as low tumor proportion (TP) (≤ 15% TP), 42 tumors (20%) were classified as high TP (≥ 54% TP), and 133 tumors (65%) were classified as medium TP. High and low TP were associated with an adverse overall survival in comparison to medium TP (p = 0.001 and p = 0.03). Furthermore, the TP was an independent risk factor of occurrence of distant metastasis next to T status, microsatellite status, and tumor budding. The 5-year survival rate was 49% in patients with high TP, 48% in patients with low TP, and 68% in patients with medium TP (p = 0.042, n = 160). Patients with a high TP had less often tumor budding (p = 0.012), lymphovascular invasion (p = 0.049), and less harvested lymph nodes (p = 0.042) in comparison to low TP tumors. The results provide first evidence that a high tumor proportion/low stroma proportion is also associated with an adverse prognosis and that this subgroup might be difficult to identify with other classical histopathologic characteristics that are linked to an adverse prognosis.

21 September 2020 in Diagnostics
Verified
Journal Article
Open access
PDF file
BMBenedikt Martin
Benedikt Martin
PMPatrick Mayr
Patrick Mayr
RIRegina Ihringer
Regina Ihringer
ESEva-Maria Schäfer
Eva-Maria Schäfer
EJElżbieta Jakubowicz
Elżbieta Jakubowicz
Bruno MärklBruno Märkl
Bruno Märkl
The prognostic significance of tumor budding in colon cancer is unequivocally documented, and the recommendations of the International Tumor Budding Consensus Conference (ITBCC) are currently the accepted basis for its assessment. Up to now, it is unknown whether the general use of a supporting cytokeratin immunohistochemistry can improve the interobserver variability and prognostic significance. Six investigators with different levels of experience reassessed 229 cases of colon carcinoma (pT3/4, N+/−, M0) with a supporting cytokeratin immunohistochemistry. The results were compared to previous assessments, which have been performed only on H & E. Bd3 was significantly associated with the occurrence of distant metastases according to the assessments of three out of six investigators (p < 0.05). Only one single investigator reached significant results concerning the cancer specific survival (p = 0.01). The pairwise kappa values range between a poor and moderate level of agreement (range 0.17–0.45; median 0.21). In conclusion, the results show no superiority of the use of an additional cytokeratin immunohistochemistry compared to the conventional analysis on sole H & E slides. Therefore, the general supporting use of a cytokeratin immunohistochemical staining seems to be inadvisable in colon cancer in consideration of necessary resources and costs.

29 June 2018 in Histopathology
Verified
Journal Article
Closed access
PDF file
BMBenedikt Martin
Benedikt Martin
ESEva Schäfer
Eva Schäfer
EJElzbieta Jakubowicz
Elzbieta Jakubowicz
PMPatrick Mayr
Patrick Mayr
RIRegina Ihringer
Regina Ihringer
BMBruno Märkl
Bruno Märkl