Babiychuk Eduard

Dr. Babiychuk Eduard

Institut für Anatomie, Bern, Switzerland

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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2 July 2010 in Cell Death & Differentiation
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Journal Article
Closed access
Babiychuk EduardBabiychuk Eduard
Babiychuk Eduard
KMK Monastyrskaya
K Monastyrskaya
SPS Potez
S Potez
ADA Draeger
A Draeger

27 March 2009 in Cell Death & Differentiation
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Journal Article
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Babiychuk EduardBabiychuk Eduard
Babiychuk Eduard
KMK Monastyrskaya
K Monastyrskaya
SPS Potez
S Potez
ADA Draeger
A Draeger

13 July 2006 in Biochemical Journal
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Journal Article
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Babiychuk EduardBabiychuk Eduard
Babiychuk Eduard
ADAnnette Draeger
Annette Draeger
Lateral segregation of cholesterol- and sphingomyelin-rich rafts and glycerophospholipid-containing non-raft microdomains has been proposed to play a role in a variety of biological processes. The most compelling evidence for membrane segregation is based on the observation that extraction with non-ionic detergents leads to solubilization of a subset of membrane components only. However, one decade later, a large body of inconsistent detergent-extraction data is threatening the very concept of membrane segregation. We have assessed the validity of the existing paradigms and we show the following. (i) The localization of a membrane component within a particular fraction of a sucrose gradient cannot be taken as a yardstick for its solubility: a variable localization of the DRMs (detergent-resistant membranes) in sucrose gradients is the result of complex associations between the membrane skeleton and the lipid bilayer. (ii) DRMs of variable composition can be generated by using a single detergent, the increasing concentration of which gradually extracts one protein/lipid after another. Therefore any extraction pattern obtained by a single concentration experiment is bound to be ‘investigator-specific’. It follows that comparison of DRMs obtained by different detergents in a single concentration experiment is prone to misinterpretations. (iii) Depletion of cholesterol has a graded effect on membrane solubility. (iv) Differences in detergent solubility of the members of the annexin protein family arise from their association with chemically different membrane compartments; however, these cannot be attributed to the ‘brick-like’ raft-building blocks of fixed size and chemical composition. Our findings demonstrate a need for critical re-evaluation of the accumulated detergent-extraction data.

1 May 2011 in Journal of Biological Chemistry
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Journal Article
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SPSarah Potez
Sarah Potez
MLMiriam Luginbühl
Miriam Luginbühl
KMKatia Monastyrskaya
Katia Monastyrskaya
AHAndrea Hostettler
Andrea Hostettler
ADAnnette Draeger
Annette Draeger
Babiychuk EduardBabiychuk Eduard
Babiychuk Eduard
The annexins, a family of Ca2+- and lipid-binding proteins, are involved in a range of intracellular processes. Recent findings have implicated annexin A1 in the resealing of plasmalemmal injuries. Here, we demonstrate that another member of the annexin protein family, annexin A6, is also involved in the repair of plasmalemmal lesions induced by a bacterial pore-forming toxin, streptolysin O. An injury-induced elevation in the intracellular concentration of Ca2+ ([Ca2+]i) triggers plasmalemmal repair. The highly Ca2+-sensitive annexin A6 responds faster than annexin A1 to [Ca2+]i elevation. Correspondingly, a limited plasmalemmal injury can be promptly countered by annexin A6 even without the participation of annexin A1. However, its high Ca2+ sensitivity makes annexin A6 highly amenable to an unproductive binding to the uninjured plasmalemma; during an extensive injury accompanied by a massive elevation in [Ca2+]i, its active pool is severely depleted. In contrast, annexin A1 with a much lower Ca2+ sensitivity is ineffective at the early stages of injury; however, it remains available for the repair even at high [Ca2+]i. Our findings highlight the role of the annexins in the process of plasmalemmal repair; a number of annexins with different Ca2+-sensitivities provide a cell with the means to react promptly to a limited injury in its early stages and, at the same time, to withstand a sustained injury accompanied by the continuous formation of plasmalemmal lesions.

15 September 2008 in Traffic
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Journal Article
Closed access
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Babiychuk EduardBabiychuk Eduard
Babiychuk Eduard
KMKatia Monastyrskaya
Katia Monastyrskaya
ADAnnette Draeger
Annette Draeger

21 February 2014 in PLOS ONE
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Journal Article
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AAAlexander P. Atanassoff
Alexander P. Atanassoff
HWHeidi Wolfmeier
Heidi Wolfmeier
RSRoman Schoenauer
Roman Schoenauer
AHAndrea Hostettler
Andrea Hostettler
ARAvi Ring
Avi Ring
Babiychuk EduardBabiychuk Eduard
Babiychuk Eduard
Pathogenic bacteria secrete pore-forming toxins that permeabilize the plasma membrane of host cells. Nucleated cells possess protective mechanisms that repair toxin-damaged plasmalemma. Currently two putative repair scenarios are debated: either the isolation of the damaged membrane regions and their subsequent expulsion as microvesicles (shedding) or lysosome-dependent repair might allow the cell to rid itself of its toxic cargo and prevent lysis. Here we provide evidence that both mechanisms operate in tandem but fulfill diverse cellular needs. The prevalence of the repair strategy varies between cell types and is guided by the severity and the localization of the initial toxin-induced damage, by the morphology of a cell and, most important, by the incidence of the secondary mechanical damage. The surgically precise action of microvesicle shedding is best suited for the instant elimination of individual toxin pores, whereas lysosomal repair is indispensable for mending of self-inflicted mechanical injuries following initial plasmalemmal permeabilization by bacterial toxins. Our study provides new insights into the functioning of non-immune cellular defenses against bacterial pathogens.