Liyana Azmi

Dr. Liyana Azmi

orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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9 January 2019 in Nature
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Journal Article
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MCMichaela J. Conley
Michaela J. Conley
MMMarion McElwee
Marion McElwee
LALiyana Azmi
Liyana Azmi
MGMads Gabrielsen
Mads Gabrielsen
OBOlwyn Byron
Olwyn Byron
DBDavid Bhella
David Bhella

4 October 2019 in Nature Communications
Verified
Journal Article
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GKGijeong Kim
Gijeong Kim
LALiyana Azmi
Liyana Azmi
SJSeongmin Jang
Seongmin Jang
TJTaeyang Jung
Taeyang Jung
HHHans Hebert
Hans Hebert
JSJi-Joon Song
Ji-Joon Song
Aldehyde-alcohol dehydrogenase (AdhE) is a key enzyme in bacterial fermentation, converting acetyl-CoA to ethanol, via two consecutive catalytic reactions. Here, we present a 3.5 Å resolution cryo-EM structure of full-length AdhE revealing a high-order spirosome architecture. The structure shows that the aldehyde dehydrogenase (ALDH) and alcohol dehydrogenase (ADH) active sites reside at the outer surface and the inner surface of the spirosome respectively, thus topologically separating these two activities. Furthermore, mutations disrupting the helical structure abrogate enzymatic activity, implying that formation of the spirosome structure is critical for AdhE activity. In addition, we show that this spirosome structure undergoes conformational change in the presence of cofactors. This work presents the atomic resolution structure of AdhE and suggests that the high-order helical structure regulates its enzymatic activity.

1 February 2023 in Nutrients
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NJNorsham Juliana
Norsham Juliana
LALiyana Azmi
Liyana Azmi
NENadia Mohd Effendy
Nadia Mohd Effendy
NTNur Islami Mohd Fahmi Teng
Nur Islami Mohd Fahmi Teng
Izuddin Fahmy AbuIzuddin Fahmy Abu
Izuddin Fahmy Abu
SDSrijit Das
Srijit Das
The circadian system in the human body responds to daily environmental changes to optimise behaviour according to the biological clock and also influences various physiological processes. The suprachiasmatic nuclei are located in the anterior hypothalamus of the brain, and they synchronise to the 24 h light/dark cycle. Human physiological functions are highly dependent on the regulation of the internal circadian clock. Skeletal muscles comprise the largest collection of peripheral clocks in the human body. Both central and peripheral clocks regulate the interaction between the musculoskeletal system and energy metabolism. The skeletal muscle circadian clock plays a vital role in lipid and glucose metabolism. The pathogenesis of osteoporosis is related to an alteration in the circadian rhythm. In the present review, we discuss the disturbance of the circadian rhythm and its resultant effect on the musculoskeletal system. We also discuss the nutritional strategies that are potentially effective in maintaining the system’s homeostasis. Active collaborations between nutritionists and physiologists in the field of chronobiological and chrononutrition will further clarify these interactions. This review may be necessary for successful interventions in reducing morbidity and mortality resulting from musculoskeletal disturbances.

14 March 2024 in PLOS ONE
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AAAmirah Azzeri
Amirah Azzeri
NMNurul Azmawati Mohamed
Nurul Azmawati Mohamed
SRSaarah Huurieyah Wan Rosli
Saarah Huurieyah Wan Rosli
MSMuttaqillah Najihan Abdul Samat
Muttaqillah Najihan Abdul Samat
ZRZetti Zainol Rashid
Zetti Zainol Rashid
LALiyana Azmi
Liyana Azmi
Genomic surveillance is crucial for tracking emergence and spread of novel variants of pathogens, such as SARS-CoV-2, to inform public health interventions and to enforce control measures. However, in some settings especially in low- and middle- income counties, where sequencing platforms are limited, only certain patients get to be selected for sequencing surveillance. Here, we show that patients with multiple comorbidities potentially harbour SARS-CoV-2 with higher mutation rates and thus deserve more attention for genomic surveillance. The relationship between the patient comorbidities, and type of amino acid mutations was assessed. Correlation analysis showed that there was a significant tendency for mutations to occur within the ORF1a region for patients with higher number of comorbidities. Frequency analysis of the amino acid substitution within ORF1a showed that nsp3 P822L of the PLpro protease was one of the highest occurring mutations. Using molecular dynamics, we simulated that the P822L mutation in PLpro represents a system with lower Root Mean Square Deviation (RMSD) fluctuations, and consistent Radius of gyration (Rg), Solvent Accessible Surface Area (SASA) values—indicate a much stabler protein than the wildtype. The outcome of this study will help determine the relationship between the clinical status of a patient and the mutations of the infecting SARS-CoV-2 virus.

8 April 2026 in IJID Regions
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Journal Article
Open access
RKRana Khanafsa
Rana Khanafsa
MIMamoun At Ibaideya
Mamoun At Ibaideya
AAAmirah Azzeri
Amirah Azzeri
NMNurul Azmawati Mohamed
Nurul Azmawati Mohamed
MZMuhammad Zarul Hanifah Md Zoqratt
Muhammad Zarul Hanifah Md Zoqratt
LALiyana Azmi
Liyana Azmi
We aimed to conduct a 4-year retrospective analysis of antimicrobial resistance (AMR) trends and infection hotspots within a major referral hospital in West Bank. A total of 18,802 bacterial isolates from 15,147 patients from the Palestine Medical Complex were assessed from January 2020 to December 2023. Data were analyzed to yield organism prevalence, trends of resistance, and ward-level infection burdens. Resistant isolates increased from 31.9% in 2020 to 37.7% in 2023, driven primarily by extended-spectrum β-lactamase–producing Escherichia coli and carbapenem-resistant Enterobacteriaceae. The emergency department, intensive care unit, and surgical unit were identified as primary hotspots for AMR. Patients aged 60-75 years showed significant infection risks, necessitating age-specific infection control management. Time trend analysis revealed seasonal peaks of AMR and a significant surge of carbapenem-resistant Acinetobacter baumanii cases during the 2022 COVID-19 pandemic, suggesting a syndemic interaction. The escalating AMR threat signifies the importance of surveillance and warrants an urgent, targeted AMR intervention. Implementation of ward-specific antimicrobial stewardship, demographic-targeted infection control, and regional data-sharing frameworks are critical to mitigating the spread of AMR in conflict-affected and fragile health systems.

19 August 2020 in Acta Crystallographica Section F Structural Biology Communications
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LALiyana Azmi
Liyana Azmi
EBEilis C. Bragginton
Eilis C. Bragginton
ICIan T. Cadby
Ian T. Cadby
OBOlwyn Byron
Olwyn Byron
ARAndrew J. Roe
Andrew J. Roe
MGMads Gabrielsen
Mads Gabrielsen
The bifunctional alcohol/aldehyde dehydrogenase (AdhE) comprises both an N-terminal aldehyde dehydrogenase (AldDH) and a C-terminal alcohol dehydrogenase (ADH). In vivo, full-length AdhE oligomerizes into long oligomers known as spirosomes. However, structural analysis of AdhE is challenging owing to the heterogeneity of the spirosomes. Therefore, the domains of AdhE are best characterized separately. Here, the structure of ADH from the pathogenic Escherichia coli O157:H7 was determined to 1.65 Å resolution. The dimeric crystal structure was confirmed in solution by small-angle X-ray scattering.