Agroforestry is indicated as a farming practice suited to enhance ecosystem services generated by cropping systems. However, farmers are often reluctant to implement agroforestry systems due to the potential yield loss of crops. In a field trial, soybean was intercropped with poplar short-rotation-coppice rows in an alley-cropping system with 13.5 m wide alleys, in order to assess the effect of tree presence on soybean yield and quality. The light availability (LA) was significantly affected by the tree presence, with an increasing effect along the season due to tree growth, being at its lowest in the tree–crop interface positions (West and East). Significant effects of the tree-distance and LA were registered on soybean yield, with the highest reduction of soybean yield in the West (−78%) and East (−35%) positions. Crude fat content in soybean grain did not vary among positions in the alley, while crude protein content was the lowest in the most shaded position (West −8% than the highest value). The assessment of spatial variability among plots of measured soil characteristics highlighted no significant effect of pedological conditions upon soybean yield. Thus, in our study, the LA effect was more important than soil characteristics in determining a detrimental effect of competition for resources between soybean and poplar. Conversely, soybean quality was affected by soil characteristics, since crude fat significantly correlated with soil nutrients, pH, soil organic matter and soil texture.

Poplar (Populus L. spp.) Short Rotation Coppice systems (SRCs) for bioenergy production are being converted back to arable land. Transitioning to Alley Cropping Systems (ACSs) could be a suitable strategy for integrating former tree rows and arable crops. A field trial (Pisa, Central Italy) was set up with the aim of assessing the C storage of an ACS system based on hybrid poplar and sorghum (Sorghum bicolor L. Moench) and comparing it with that of an SRC cultivation system. The carbon budget at the agroecosystem scale was assessed in the first year of the transition using the net biome production (NBP) approach with a simplified method. The overall NBP for the SRC was positive (96 ± 40 g C m⁻² year⁻¹), highlighting that the system was a net carbon sink (i.e., NBP > 0). However, the ACS registered a net C loss (i.e., NBP < 0), since the NBP was −93 ± 56 g C m⁻² year⁻¹. In the first year of the transition, converting the SRC into an ACS counteracted the potential beneficial effect of C storage in tree belowground biomass due to the high heterotrophic respiration rate recorded in the ACS, which was fostered by the incorporation of residues and tillage disturbance in the alley. Additional years of heterotrophic respiration measurements could allow for an estimate of the speed and extent of C losses.