Phytoplankton abundance and seasonality in the northeastern Adriatic Sea were directly related to the annual regime of the Po River discharge in the period 2002–2007. In 2005, 2006, and 2007, there was a shift in the timing of the annual Po River maximum discharge and of phytoplankton maxima from spring to autumn. In addition, the eastern coastal area was greatly influenced by oligotrophic karstic rivers and the Eastern Adriatic Current. Dominant phytoplankton taxa were defined on the basis of abundance and frequency of appearance. Such an approach may help in the comparison of phytoplankton communities within different environments. The dominant taxa were the diatomsCerataulina pelagica,Chaetoceros socialis,Chaetoceros vixvisibilisandPseudo-nitzschiaspp., which appeared at maximum abundances >10⁶cells l^-1in more than 20% of samples. Among other phytoplankton, the most common was the coccolithophoridEmiliania huxleyi(maximum abundance of 2×10⁵cells l^-1in 50% of samples), and the dinoflagellateProrocentrum minimum(maximum abundance of 3×10⁵cells l^-1in 12% of samples). The present state of the phytoplankton community may provide valuable information for evaluation of possible future environmental changes in the shallow Mediterranean ecosystem.

During the June 2010 survey of phytoplankton and physicochemical parameters in the Krka River estuary (eastern Adriatic Sea), a cryptophyte bloom was observed. High abundance of cryptophytes (maximum 7.9×106 cells l–1) and high concentrations of the class-specific biomarker pigment alloxanthine (maximum 2312 ng l–1) were detected in the surface layer and at the halocline in the lower reach of the estuary. Taxonomical analysis revealed that the blooming species was Plagioselmis cf. prolonga. Analysis of the environmental parameters in the estuary suggested that the bloom was supported by the slower river flow as well as the increased orthophosphate and ammonium concentrations. The first record of a cryptophyte bloom in the Krka River estuary may indicate that large-scale changes are taking place in the phytoplankton community. Such changes could have a major impact on the natural ecosystem dynamics and the mariculture production in the area.

Background: Microbial communities of wild animals are being increasingly investigated to provide information about the hosts’ biology and promote conservation. Loggerhead sea turtles (Caretta caretta) are a keystone species in marine ecosystems and are considered vulnerable in the IUCN Red List, which led to growing efforts in sea turtle conservation by rescue centers around the world. Understanding the microbial communities of sea turtles in the wild and how affected they are by captivity, is one of the stepping stones in improving the conservation efforts. Describing oral and cloacal microbiota of wild animals could shed light on the previously unknown aspects of sea turtle holobiont biology, ecology, and contribute to best practices for husbandry conditions.Results: We describe the oral and cloacal microbiota of Mediterranean loggerhead sea turtles by 16S rRNA gene sequencing to compare the microbial communities of wildversusturtles in, or after, rehabilitation at the Adriatic Sea rescue centers and clinics. Our results show that the oral microbiota is more sensitive to environmental shifts than the cloacal microbiota, and that it does retain a portion of microbial taxa regardless of the shift from the wild and into rehabilitation. Additionally, Proteobacteria and Bacteroidetes dominated oral and cloacal microbiota, while Kiritimatiellaeota were abundant in cloacal samples. Unclassified reads were abundant in the aforementioned groups, which indicates high incidence of yet undiscovered bacteria of the marine reptile microbial communities.Conclusions: We provide the first insights into the oral microbial communities of wild and rehabilitated loggerhead sea turtles, and establish a framework for quick and non-invasive sampling of oral and cloacal microbial communities, useful for the expansion of the sample collection in wild loggerhead sea turtles. Finally, our investigation of effects of captivity on the gut-associated microbial community provides a baseline for studying the impact of husbandry conditions on turtles’ health and survival upon their return to the wild.

Phytoplankton in karst lakes is characterized by co-occurrence of chrysophytes (Chrysophyceae), dinoflagellates (Dinophyceae), and diatoms (Bacillariophyta) as the most diverse and abundant group. Using Reynolds functional approach in ecological phytoplankton investigations makes karstic lakes comparable and facilitates interpretation of their responses to changing environmental conditions. Accurate taxonomic identification to species level, based on precise resolution of specific characteristics by electron microscopy, is essential in order to correctly associate species into coda. This paper defines the most abundant centric diatoms and coexisting species in the phytoplankton of karst lakes in Croatia as a contribution to better description of phytoplankton functional groups dominated by centric diatoms. Several representatives for diatom-based Reynolds functional groups of four lakes in Croatia were described in this paper: Pantocsekiella costei and Stephanocostis chantaica for group A, Pantocsekiella ocellata and Cyclotella distinguenda for group B, and Stephanodiscus neoastraea for group C, together with their ecological preferences which clearly correspond to pertaining functional classification. Selected and coexisting functional groups define natural, oligo- to mesotrophic karst deep lake systems.