Katarzyna Pogoda

Dr. Katarzyna Pogoda

Institute of Nuclear Physics Polish Academy of Sciences, PL-31342, Krakow, Poland
orcid

Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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31 January 2018 in Nature Communications
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ECElisabeth E. Charrier
Elisabeth E. Charrier
KPKatarzyna Pogoda
Katarzyna Pogoda
RWRebecca G. Wells
Rebecca G. Wells
PJPaul A. Janmey
Paul A. Janmey
The mechanical properties of extracellular matrices can control the function of cells. Studies of cellular responses to biomimetic soft materials have been largely restricted to hydrogels and elastomers that have stiffness values independent of time and extent of deformation, so the substrate stiffness can be unambiguously related to its effect on cells. Real tissues, however, often have loss moduli that are 10 to 20% of their elastic moduli and behave as viscoelastic solids. The response of cells to a time-dependent viscous loss is largely uncharacterized because appropriate viscoelastic materials are lacking for quantitative studies. Here we report the synthesis of soft viscoelastic solids in which the elastic and viscous moduli can be independently tuned to produce gels with viscoelastic properties that closely resemble those of soft tissues. Systematic alteration of the hydrogel viscosity demonstrates the time dependence of cellular mechanosensing and the influence of viscous dissipation on cell phenotype.

1 February 2012 in Archives of Biochemistry and Biophysics
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MLMalgorzata Lekka
Malgorzata Lekka
DGDorota Gil
Dorota Gil
KPKatarzyna Pogoda
Katarzyna Pogoda
JDJoanna Dulińska-Litewka
Joanna Dulińska-Litewka
RJRobert Jach
Robert Jach
PLPiotr Laidler
Piotr Laidler

1 December 2012 in Micron
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Journal Article
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MLMalgorzata Lekka
Malgorzata Lekka
KPKatarzyna Pogoda
Katarzyna Pogoda
JGJustyna Gostek
Justyna Gostek
OKOlesya Klymenko
Olesya Klymenko
SPSzymon Prauzner-Bechcicki
Szymon Prauzner-Bechcicki
ZSZbigniew Stachura
Zbigniew Stachura

1 November 2019 in Journal of Cell Biology
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APAlison E. Patteson
Alison E. Patteson
AVAmir Vahabikashi
Amir Vahabikashi
KPKatarzyna Pogoda
Katarzyna Pogoda
SAStephen A. Adam
Stephen A. Adam
Kalpana MandalKalpana Mandal
Kalpana Mandal
PJPaul Janmey
Paul Janmey
Mammalian cells frequently migrate through tight spaces during normal embryogenesis, wound healing, diapedesis, or in pathological situations such as metastasis. Nuclear size and shape are important factors in regulating the mechanical properties of cells during their migration through such tight spaces. At the onset of migratory behavior, cells often initiate the expression of vimentin, an intermediate filament protein that polymerizes into networks extending from a juxtanuclear cage to the cell periphery. However, the role of vimentin intermediate filaments (VIFs) in regulating nuclear shape and mechanics remains unknown. Here, we use wild-type and vimentin-null mouse embryonic fibroblasts to show that VIFs regulate nuclear shape and perinuclear stiffness, cell motility in 3D, and the ability of cells to resist large deformations. These changes increase nuclear rupture and activation of DNA damage repair mechanisms, which are rescued by exogenous reexpression of vimentin. Our findings show that VIFs provide mechanical support to protect the nucleus and genome during migration.

1 July 2014 in New Journal of Physics
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KPKatarzyna Pogoda
Katarzyna Pogoda
LCLiKang Chin
LiKang Chin
PGPenelope C Georges
Penelope C Georges
FBFitzRoy J Byfield
FitzRoy J Byfield
RBRobert Bucki
Robert Bucki
PJPaul Janmey
Paul Janmey
Many cell types, including neurons, astrocytes and other cells of the central nervous system respond to changes in extracellular matrix or substrate viscoelasticity, and increased tissue stiffness is a hallmark of several disease states including fibrosis and some types of cancers. Whether the malignant tissue in brain, an organ that lacks the protein-based filamentous extracellular matrix of other organs, exhibits the same macroscopic stiffening characteristic of breast, colon, pancreatic, and other tumors is not known. In this study we show that glioma cells like normal astrocytes, respond strongly in vitro to substrate stiffness in the range of 100 to 2000 Pa, but that macroscopic (mm to cm) tissue samples isolated from human glioma tumors have elastic moduli on the order of 200 Pa that are indistinguishable from those of normal brain. However, both normal brain and glioma tissues increase their shear elastic moduli under modest uniaxial compression, and glioma tissue stiffens more strongly under compression than does normal brain. These findings suggest that local tissue stiffness has the potential to alter glial cell function, and that stiffness changes in brain tumors might arise not from increased deposition or crosslinking of collagen-rich extracellular matrix but from pressure gradients that form within the tumors in vivo.

28 August 2019 in Nature
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AOAnne S. G. van Oosten
Anne S. G. van Oosten
XCXingyu Chen
Xingyu Chen
LCLiKang Chin
LiKang Chin
KCKatrina Cruz
Katrina Cruz
APAlison E. Patteson
Alison E. Patteson
PJPaul Janmey
Paul Janmey