Danilo D'Apolito

Dr. Danilo D'Apolito

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Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 November 2020 in Microbiological Research
Verified
Journal Article
Closed access
DDDanilo D'Apolito
Danilo D'Apolito
FAFabio Arena
Fabio Arena
VCViola Conte
Viola Conte
LALucia Henrici De Angelis
Lucia Henrici De Angelis
GMGiuseppina Di Mento
Giuseppina Di Mento
BDBruno Douradinha
Bruno Douradinha

1 August 2009 in Molecular Therapy
Verified
Journal Article
Open access
DDDanilo D'Apolito
Danilo D'Apolito
EBElena Baiamonte
Elena Baiamonte
MBMariella Bagliesi
Mariella Bagliesi
RMRosalba Di Marzo
Rosalba Di Marzo
RCRoberta Calzolari
Roberta Calzolari
SASantina Acuto
Santina Acuto
Silencing and position-effect (PE) variegation (PEV), which is due to integration of viral vectors in heterochromatin regions, are considered significant obstacles to obtaining a consistent level of transgene expression in gene therapy. The inclusion of chromatin insulators into vectors has been proposed to counteract this position-dependent variegation of transgene expression. Here, we show that the sea urchin chromatin insulator, sns5, protects a recombinant γ-retroviral vector from the negative influence of chromatin in erythroid milieu. This element increases the probability of vector expression at different chromosomal integration sites, which reduces both silencing and PEV. By chromatin immunoprecipitation (ChIP) analysis, we demonstrated the specific binding of GATA1 and OCT1 transcription factors and the enrichment of hyperacetylated nucleosomes to sns5 sequences. The results suggest that this new insulator is able to maintain a euchromatin state inside the provirus locus with mechanisms that are common to other characterized insulators. On the basis of its ability to function as barrier element in erythroid milieu and to bind the erythroid specific factor GATA1, the inclusion of sns5 insulator in viral vectors may be of practical benefit in gene transfer applications and, in particular, for gene therapy of erythroid disorders.

GMGiuseppina Di Martino
Giuseppina Di Martino
SPSalvatore Pasqua
Salvatore Pasqua
BDBruno Douradinha
Bruno Douradinha
Francesco MonacoFrancesco Monaco
Francesco Monaco
CBChiara Di Bartolo
Chiara Di Bartolo
DDDanilo D'Apolito
Danilo D'Apolito
To evaluate and validate the efficacy of disinfectants used in our cleaning procedure, in order to reduce pharmaceutical hospital surfaces’ contaminations, we tested the action of three commercial disinfectants on small representative samples of the surfaces present in our hospital cleanrooms. These samples (or coupons) were contaminated with selected microorganisms for the validation of the disinfectants. The coupons were sampled before and after disinfection and the microbial load was assessed to calculate the Log10 reduction index. Subsequently, we developed and validated a disinfection procedure on real surfaces inside the cleanrooms intentionally contaminated with microorganisms, using approximately 107–108 total colony forming units per coupon. Our results showed a bactericidal, fungicidal, and sporicidal efficacy coherent to the acceptance criteria suggested by United States Pharmacopeia 35 . The correct implementation of our cleaning and disinfection procedure, respecting stipulated concentrations and contact times, led to a reduction of at least 6 Log10 for all microorganisms used. The proposed disinfection procedure reduced the pharmaceutical hospital surfaces’ contaminations, limited the propagation of microorganisms in points adjacent to the disinfected area, and ensured high disinfection and safety levels for operators, patients, and treated surfaces.

1 March 2020 in Biologicals
Verified
Journal Article
Closed access
DDDanilo D'Apolito
Danilo D'Apolito
LDLucia D'AIello
Lucia D'AIello
SPSalvatore Pasqua
Salvatore Pasqua
LPLucia Pecoraro
Lucia Pecoraro
FBFloriana Barbera
Floriana Barbera
PCPier Giulio Conaldi
Pier Giulio Conaldi

Verified
Journal Article
Open access
PDF file
ACAnna Paola Carreca
Anna Paola Carreca
VPVeronica Pravata
Veronica Pravata
DDDanilo D'Apolito
Danilo D'Apolito
SBSimone Bonelli
Simone Bonelli
MCMatteo Calligaris
Matteo Calligaris
Simone D. ScilabraSimone D. Scilabra
Simone D. Scilabra
Ectodomain shedding is a key mechanism of several biological processes, including cell-communication. Disintegrin and metalloproteinases (ADAMs), together with the membrane-type matrix metalloproteinases, play a pivotal role in shedding transmembrane proteins. Aberrant shedding is associated to several pathological conditions, including arthritis. Tissue inhibitor of metalloproteases 3 (TIMP-3), an endogenous inhibitor of ADAMs and matrix metalloproteases (MMPs), has been proven to be beneficial in such diseases. Thus, strategies to increase TIMP-3 bioavailability in the tissue have been sought for development of therapeutics. Nevertheless, high levels of TIMP-3 may lead to mechanism-based side-effects, as its overall effects on cell behavior are still unknown. In this study, we used a high-resolution mass-spectrometry-based workflow to analyze alterations induced by sustained expression of TIMP-3 in the cell surfaceome. In agreement with its multifunctional properties, TIMP-3 induced changes on the protein composition of the cell surface. We found that TIMP-3 had differential effects on metalloproteinase substrates, with several that accumulated in TIMP-3-overexpressing cells. In addition, our study identified potentially novel ADAM substrates, including ADAM15, whose levels at the cell surface are regulated by the inhibitor. In conclusion, our study reveals that high levels of TIMP-3 induce modifications in the cell surfaceome and identifies molecular pathways that can be deregulated via TIMP-3-based therapies.

1 March 2021 in Molecular Therapy - Methods & Clinical Development
Verified
Journal Article
Open access
SPSalvatore Pasqua
Salvatore Pasqua
GVGiampiero Vitale
Giampiero Vitale
APAnna Pasquariello
Anna Pasquariello
BDBruno Douradinha
Bruno Douradinha
FTFabio Tuzzolino
Fabio Tuzzolino
DDDanilo D'Apolito
Danilo D'Apolito
Effective detection of microbiological contaminations present in medicinal cellular products is a crucial step to ensure patients’ safety. In recent decades, several rapid microbiological methods have been developed and validated, but variabilities linked to the use of different resources have led to discordant validation of methods and performance results. Considering this, while developing an in-house BacT/Alert-based method, we evaluated all of the materials used in its validation. Of particular importance, we noticed that the syringe gauge used to inject the samples into the bottles was crucial to obtain robust results. We chose to conduct a comparative test between the BacT/Alert system and the compendial method described in the European Pharmacopoeia, using five dilutions of nine reference microorganism strains and 21G or 27G needles. Our results confirmed that the BacT/Alert system is a valid and faster alternative method to assess sterility of clinical cell therapy products, and that the use of 27G needles increases its sensitivity to detect reference anaerobe microorganisms.