Radoslaw Sobota

Dr. Radoslaw Sobota

Agency for Science, Technology and Research (A*STAR), Institute of Molecular and Cell Biology (IMCB), Singapore

Research Focus & Metrics

Academic Career Length

27Years (2000-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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25 February 2019 in Nature Microbiology
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MAMatae Ahn
Matae Ahn
DADanielle Anderson
Danielle Anderson
QZQian Zhang
Qian Zhang
CTChee Wah Tan
Chee Wah Tan
BLBeng Lee Lim
Beng Lee Lim
LWLin-Fa Wang
Lin-Fa Wang

28 October 2015 in Nature Communications
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Journal Article
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EVElena Viganò
Elena Viganò
CDCatherine Emma Diamond
Catherine Emma Diamond
RSRoberto Spreafico
Roberto Spreafico
ABAkhila Balachander
Akhila Balachander
Radoslaw SobotaRadoslaw Sobota
Radoslaw Sobota
AMAlessandra Mortellaro
Alessandra Mortellaro
Monocytes promote the early host response to infection releasing key pro-inflammatory cytokines, such as IL-1β. The biologically inactive IL-1β precursor is processed to active form by inflammasomes, multi-protein complexes activating caspase-1. Human monocytes exhibit an unconventional one-step pathway of inflammasome activation in response to lipopolysaccharide (LPS) alone. Although this lineage-restricted mechanism is likely to contribute to the pathology of endotoxin shock, signalling pathways regulating this mechanism are currently unknown. Here we report that caspase-4 and caspase-5 mediate IL-1α and IL-1β release from human monocytes after LPS stimulation. Although caspase-4 remains uncleaved, caspase-5 undergoes rapid processing upon LPS treatment. We also identify an additional caspase-5 cleavage product in LPS-stimulated monocytes, which correlates with IL-1 secretion. This one-step pathway requires Syk activity and Ca2+ flux instigated by CD14/TLR4-mediated LPS internalization. Identification of caspase-4/5 as the key determinants of one-step inflammasome activation in human monocytes provides potential targets for therapeutic intervention in endotoxin shock.

1 November 2023 in Nature
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DPDong Shin Park
Dong Shin Park
TKTatsuya Kozaki
Tatsuya Kozaki
STSatish Kumar Tiwari
Satish Kumar Tiwari
MMMarco Moreira
Marco Moreira
AKAhad Khalilnezhad
Ahad Khalilnezhad
FGFlorent Ginhoux
Florent Ginhoux

1 December 2018 in Journal of Biological Chemistry
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FZFranklin L. Zhong
Franklin L. Zhong
KRKim Robinson
Kim Robinson
DTDaniel Eng Thiam Teo
Daniel Eng Thiam Teo
KTKiat-Yi Tan
Kiat-Yi Tan
CLChrissie Lim
Chrissie Lim
BRBruno Reversade
Bruno Reversade
The inflammasome is a critical molecular complex that activates IL-1 driven inflammation in response to pathogen- and danger-associated signals. Germline mutations in the inflammasome sensor, NLRP1 cause Mendelian systemic autoimmunity and skin cancer susceptibility, but its endogenous regulation remains less understood. Here we use a proteomics screen to uncover dipeptidyl dipeptidase, DPP9 as a novel interacting partner with human NLRP1 and a related inflammasome regulator, CARD8. DPP9 functions as an endogenous inhibitor of NLRP1 inflammasome in diverse primary cell types from human and mice. DPP8/9 inhibition via small molecule drugs and CRISPR/Cas9-mediated genetic deletion specifically activate human NLRP1 inflammasome, leading to ASC speck formation, pyroptotic cell death and secretion of cleaved IL-1β. Mechanistically, DPP9 interacts with a unique auto-proteolytic domain (FIIND) found in NLRP1 and CARD8. This scaffolding function of DPP9 and its catalytic activity act synergistically to maintain NLRP1 in its inactive state and repress downstream inflammasome activation. We further identified a single patient-derived germline missense mutation in NLRP1 FIIND domain that abrogates DPP9 binding, leading to inflammasome hyper-activation seen in the Mendelian auto-inflammatory disease AIADK. These results unite recent findings on the regulation of murine Nlrp1b by Dpp8/9 and uncover a new regulatory mechanism for the NLRP1 inflammasome in primary human cells. Our results further suggest that DPP9 could be a multi-functional inflammasome regulator involved in human auto-inflammatory diseases.

9 March 2018 in Science
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CTChris Soon Heng Tan
Chris Soon Heng Tan
KGKa Diam Go
Ka Diam Go
XBXavier Bisteau
Xavier Bisteau
LDLingyun Dai
Lingyun Dai
CYChern Han Yong
Chern Han Yong
PNPär Nordlund
Pär Nordlund
Taking the heat together: Many of the processes in living cells are mediated by protein complexes that dynamically assemble and dissociate depending on cellular needs. Tan et al. developed a method called thermal proximity coaggregation (TPCA) to monitor the dynamics of native protein complexes inside cells (see the Perspective by Li et al. ). The method is based on the idea that proteins within a complex will coaggregate upon heat denaturation. It uses a previously described cellular shift assay to determine melting curves for thousands of proteins and assigns a TPCA signature on the basis of similarity between the curves. The method was validated by detection of many known protein complexes. It identified cell-specific interactions in six cell lines, highlighting the potential for identifying protein complexes that are modulated by disease. Science , this issue p. 1170 ; see also p. 1105

2 January 2019 in Science Translational Medicine
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JDJerzy M. Dziekan
Jerzy M. Dziekan
HYHan Yu
Han Yu
DCDan Chen
Dan Chen
LDLingyun Dai
Lingyun Dai
GWGrennady Wirjanata
Grennady Wirjanata
PNPär Nordlund
Pär Nordlund
A cellular thermal shift assay (CETSA) protocol identifies and resolves antimalarial drug targets in P. falciparum .