Sandeep Gupta

Dr. Sandeep Gupta

orcid

Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
23 May 2012 in Innate Immunity
Verified
Journal Article
Closed access
PDF file
SGSandeep Gupta
Sandeep Gupta
BHBrendan J Haigh
Brendan J Haigh
FGFrank J Griffin
Frank J Griffin
TWThomas T Wheeler
Thomas T Wheeler
The mammalian ribonucleaseA family comprises a large group of structurally similar proteins which are secreted by a range of tissues and immune cells. Their physiological role is unclear. It has been suggested that some of these RNases contribute to host defence, notably eosinophil-derived neurotoxin, eosinophil cationic protein, eosinophil-associated RNases, RNase4, angiogenin (RNase5), RNase7, RNase8 and bovine seminal RNase. This review summarises data supporting the involvement of these proteins in host defence, focusing on their antimicrobial, cytotoxic and immunomodulatory activities. The extent to which the data support possible mechanisms of action for these proteins is discussed. This compilation of findings and current hypotheses on the physiological role of these RNases will provide a stimulus for further research and development of ideas on the contribution of the RNases to host defence.

13 September 2016 in ACS Biomaterials Science & Engineering
Verified
Journal Article
Closed access
NPNatalie A. Parlane
Natalie A. Parlane
SGSandeep Gupta
Sandeep Gupta
PRPatricia Rubio-Reyes
Patricia Rubio-Reyes
SCShuxiong Chen
Shuxiong Chen
MGMajela Gonzalez-Miro
Majela Gonzalez-Miro
BRBernd Rehm
Bernd Rehm

1 January 2012 in Animal
Verified
Journal Article
Open access
PDF file
TWT. T. Wheeler
T. T. Wheeler
GSG. A. Smolenski
G. A. Smolenski
DHD. P. Harris
D. P. Harris
SGSandeep Gupta
Sandeep Gupta
BHB. J. Haigh
B. J. Haigh
KSK. Stelwagen
K. Stelwagen
Milk is a source of bioactive molecules with wide-ranging functions. Among these, the immune properties have been the best characterised. In recent years, it has become apparent that besides the immunoglobulins, milk also contains a range of minor immune-related proteins that collectively form a significant first line of defence against pathogens, acting both within the mammary gland itself as well as in the digestive tract of the suckling neonate. We have used proteomics technologies to characterise the repertoire of host-defence-related milk proteins in detail, revealing more than 100 distinct gene products in milk, of which at least 15 are known host-defence-related proteins. Those having intrinsic antimicrobial activity likely function as effector proteins of the local mucosal immune defence (e.g. defensins, cathelicidins and the calgranulins). Here, we focus on the activities and biological roles of the cathelicidins and mammary serum amyloid A. The function of the immune-related milk proteins that do not have intrinsic antimicrobial activity is also discussed, notably lipopolysaccharide-binding protein, RNase4, RNase5/angiogenin and cartilage-glycoprotein 39 kDa. Evidence is shown that at least some of these facilitate recognition of microbes, resulting in the activation of innate immune signalling pathways in cells associated with the mammary and/or gut mucosal surface. Finally, the contribution of the bacteria in milk to its functionality is discussed. These investigations are elucidating how an effective first line of defence is achieved in the bovine mammary gland and how milk contributes to optimal digestive function in the suckling calf. This study will contribute to a better understanding of the health benefits of milk, as well as to the development of high-value ingredients from milk.

1 November 2018 in Journal of Dairy Science
Verified
Journal Article
Closed access
SGSandeep Gupta
Sandeep Gupta
PMPaul H. Maclean
Paul H. Maclean
SGSiva Ganesh
Siva Ganesh
DSDairu Shu
Dairu Shu
BBBryce M. Buddle
Bryce M. Buddle
AHAxel Heiser
Axel Heiser
Mycobacterium avium subspecies paratuberculosis (MAP) causes Johne's disease in ruminants, which is characterized by chronic progressive granulomatous enteritis. The infection leads to wasting and weight loss in the animals and eventually death, causing considerable production losses to the agricultural industry worldwide. Currently available ELISA- and PCR-based diagnostic tests have limited sensitivity and specificity during early MAP infection in cattle, suggesting that there is an urgent demand for alternative diagnostic tests. Circulating microRNA (miRNA) have recently gained attention as potential biomarkers for several diseases in humans. However, knowledge and use of miRNA as biomarkers in diseases of ruminants, including Johne's disease, are very limited. Here we used NanoString nCounter technology (NanoString, Seattle, WA), a digital platform for amplification-free and hybridization-based quantitative measurement of miRNA in the sera of noninfected and naturally MAP-infected cattle with different severity of infection. Using probes developed against human miRNA, 26 miRNA were detected in cattle serum; 13 of these miRNA were previously uncharacterized for cattle. Canonical discrimination analysis using 20 miRNA grouped animals into 4 distinct clusters based on their disease status, suggesting that the levels of these miRNA can reflect disease severity. A model was developed using a combination of 4 miRNA (miR-1976, miR-873-3p, miR-520f-3p, and miR-126-3p), which distinguished moderate and severely infected animals from noninfected animals. Our study demonstrated the ability of the NanoString nCounter technology to detect differential expression of circulating miRNA in cattle and contributes to widely growing evidence that miRNA can be used as biomarkers in infectious diseases in cattle.

19 January 2023 in PLOS ONE
Verified
Journal Article
Open access
PDF file
SGSandeep Gupta
Sandeep Gupta
NPNatalie Parlane
Natalie Parlane
BBBenjamin Bridgeman
Benjamin Bridgeman
ALAmy T Lynch
Amy T Lynch
EDEmma M Dangerfield
Emma M Dangerfield
DWD Neil Wedlock
D Neil Wedlock
Bronchopneumonia is a common respiratory disease in livestock.Mannheimia haemolyticais considered the main causative pathogen leading to lung damage in sheep, withMycoplasma ovipneumoniaeand ParaInfluenza virus type 3, combined with adverse physical and physiological stress, being predisposing factors. A balance of humoral and cellular immunity is thought to be important for protection against developing respiratory disease. In the current study, we compared the ability of the trehalose glycolipid adjuvant C18Brar (C18-alkylated brartemicin analogue) and three commercially available adjuvant systemsi.e., Quil-A, Emulsigen-D, and a combination of Quil-A and aluminium hydroxide gel, to stimulate antibody and cellular immune responses to antigens from inactivated whole cells ofM.haemolyticaandM.ovipneumoniaein sheep. C18Brar and Emulsigen-D induced the strongest antigen-specific antibody responses to bothM.haemolyticaandM.ovipneumoniae, while C18Brar and Quil-A promoted the strongest antigen-specific IL-17A responses. The expression of genes with known immune functions was determined in antigen-stimulated blood cultures using Nanostring nCounter technology. The expression levels ofCD40,IL22,TGFB1, andIL2RAwere upregulated in antigen-stimulated blood cultures from animals vaccinated with C18Brar, which is consistent with T-cell activation. Collectively, the results demonstrate that C18Brar can promote both antibody and cellular responses, notably Th17 immune responses in a ruminant species.

4 February 2021 in PLOS ONE
Verified
Journal Article
Open access
PDF file
SGSandeep Gupta
Sandeep Gupta
QDQing Deng
Qing Deng
TGTanushree B. Gupta
Tanushree B. Gupta
PMPaul Maclean
Paul Maclean
Jörg JoresJörg Jores
Jörg Jores
DWD. Neil Wedlock
D. Neil Wedlock
Mycoplasma ovipneumoniae infects both sheep and goats causing pneumonia resulting in considerable economic losses worldwide. Current diagnosis methods such as bacteriological culture, serology, and PCR are time consuming and require sophisticated laboratory setups. Here we report the development of two rapid, specific and sensitive assays; an isothermal DNA amplification using recombinase polymerase amplification (RPA) and a real-time PCR for the detection of M. ovipneumoniae. The target for both assays is a specific region of gene WP_069098309.1, which encodes a hypothetical protein and is conserved in the genome sequences of ten publicly available M. ovipneumoniae strains. The RPA assay performed well at 39°C for 20 min and was combined with a lateral flow dipstick (RPA-LFD) for easy visualization of the amplicons. The detection limit of the RPA-LFD assay was nine genome copies of M. ovipneumoniae per reaction and was comparable to sensitivity of the real-time PCR assay. Both assays showed no cross-reaction with 38 other ovine and caprine pathogenic microorganisms and two parasites of ruminants, demonstrating a high degree of specificity. The assays were validated using bronchoalveolar lavage fluid and nasal swab samples collected from sheep. The positive rate of RPA-LFD (97.4%) was higher than the real-time PCR (95.8%) with DNA as a template purified from the clinical samples. The RPA assay was significantly better at detecting M. ovipneumoniae in clinical samples compared to the real-time PCR when DNA extraction was omitted (50% and 34.4% positive rate for RPA-LFD and real-time PCR respectively). The RPA-LFD developed here allows easy and rapid detection of M. ovipneumoniae infection without DNA extraction, suggesting its potential as a point-of-care test for field settings.