Decreasing concentrations of dissolved oxygen in the ocean are considered one of the main threats to marine ecosystems as they jeopardize the growth of higher organisms. They also alter the marine nitrogen cycle, which is strongly bound to the carbon cycle and climate. While higher organisms in general start to suffer from oxygen concentrations < ∼ 63 µM (hypoxia), the marine nitrogen cycle responds to oxygen concentration below a threshold of about 20 µM (microbial hypoxia), whereas anoxic processes dominate the nitrogen cycle at oxygen concentrations of < ∼ 0.05 µM (functional anoxia). The Arabian Sea and the Bay of Bengal are home to approximately 21 % of the total volume of ocean waters revealing microbial hypoxia. While in the Arabian Sea this oxygen minimum zone (OMZ) is also functionally anoxic, the Bay of Bengal OMZ seems to be on the verge of becoming so. Even though there are a few isolated reports on the occurrence of anoxia prior to 1960, anoxic events have so far not been reported from the open northern Indian Ocean (i.e., other than on shelves) during the last 60 years. Maintenance of functional anoxia in the Arabian Sea OMZ with oxygen concentrations ranging between > 0 and ∼ 0.05 µM is highly extraordinary considering that the monsoon reverses the surface ocean circulation twice a year and turns vast areas of the Arabian Sea from an oligotrophic oceanic desert into one of the most productive regions of the oceans within a few weeks. Thus, the comparably low variability of oxygen concentration in the OMZ implies stable balances between the physical oxygen supply and the biological oxygen consumption, which includes negative feedback mechanisms such as reducing oxygen consumption at decreasing oxygen concentrations (e.g., reduced respiration). Lower biological oxygen consumption is also assumed to be responsible for a less intense OMZ in the Bay of Bengal. According to numerical model results, a decreasing physical oxygen supply via the inflow of water masses from the south intensified the Arabian Sea OMZ during the last 6000 years, whereas a reduced oxygen supply via the inflow of Persian Gulf Water from the north intensifies the OMZ today in response to global warming. The first is supported by data derived from the sedimentary records, and the latter concurs with observations of decreasing oxygen concentrations and a spreading of functional anoxia during the last decades in the Arabian Sea. In the Arabian Sea decreasing oxygen concentrations seem to have initiated a regime shift within the pelagic ecosystem structure, and this trend is also seen in benthic ecosystems. Consequences for biogeochemical cycles are as yet unknown, which, in addition to the poor representation of mesoscale features in global Earth system models, reduces the reliability of estimates of the future OMZ development in the northern Indian Ocean.

Data obtained from long-term sediment trap experiments in the Indian Ocean in conjunction with satellite observations illustrate the influence of primary production and the ballast effect on organic carbon flux into the deep sea. They suggest that primary production is the main control on the spatial variability of organic carbon fluxes at most of our study sites in the Indian Ocean, except at sites influenced by river discharges. At these sites the spatial variability of organic carbon flux is influenced by lithogenic matter content. To quantify the impact of lithogenic matter on the organic carbon flux, the densities of the main ballast minerals, their flux rates and seawater properties were used to calculate sinking speeds of material intercepted by sediment traps. Sinking speeds in combination with satellite-derived export production rates allowed us to compute organic carbon fluxes. Flux calculations imply that lithogenic matter ballast increases organic carbon fluxes at all sampling sites in the Indian Ocean by enhancing sinking speeds and reducing the time of organic matter respiration in the water column. We calculated that lithogenic matter content in aggregates and pellets enhances organic carbon flux rates on average by 45 % and by up to 62 % at trap locations in the river-influenced regions of the Indian Ocean. Such a strong lithogenic matter ballast effect explains the fact that organic carbon fluxes are higher in the low-productive southern Java Sea compared to the high-productive western Arabian Sea. It also implies that land use changes and the associated enhanced transport of lithogenic matter from land into the ocean may significantly affect the CO₂ uptake of the organic carbon pump in the receiving ocean areas.

Tropical peatlands play an important role in the global carbon cycle due to their immense carbon storage capacity. However, pristine peat swamp forests are vanishing due to deforestation and peatland degradation, especially in Southeast Asia. CO2 emissions associated with this land use change might not only come from the peat soil directly but also from peat-draining rivers. So far, though, this has been mere speculation, since there has been no data from undisturbed reference sites. We present the first combined assessment of lateral organic carbon fluxes and CO2 outgassing from an undisturbed tropical peat-draining river. Two sampling campaigns were undertaken on the Maludam River in Sarawak, Malaysia. The river catchment is covered by protected peat swamp forest, offering a unique opportunity to study a peat-draining river in its natural state, without any influence from tributaries with different characteristics. The two campaigns yielded consistent results. Dissolved organic carbon (DOC) concentrations ranged between 3222 and 6218 μmol L−1 and accounted for more than 99 % of the total organic carbon (TOC). Radiocarbon dating revealed that the riverine DOC was of recent origin, suggesting that it derives from the top soil layers and surface runoff. We observed strong oxygen depletion, implying high rates of organic matter decomposition and consequently CO2 production. The measured median pCO2 was 7795 and 8400 μatm during the first and second campaign, respectively. Overall, we found that only 32 ± 19 % of the carbon was exported by CO2 evasion, while the rest was exported by discharge. CO2 outgassing seemed to be moderated by the short water residence time. Since most Southeast Asian peatlands are located at the coast, this is probably an important limiting factor for CO2 outgassing from most of its peat-draining rivers.

At present, the Arabian Sea has a permanent oxygen minimum zone (OMZ) at water depths between about 100 and 1200 m. Active denitrification in the upper part of the OMZ is recorded by enhanced δ ¹⁵ N values in the sediments. Sediment cores show a δ ¹⁵ N increase during the middle and late Holocene, which is contrary to the trend in the other two regions of water column denitrification in the eastern tropical North and South Pacific. We calculated composite sea surface temperature (SST) and δ ¹⁵ N ratios in time slices of 1000 years of the last 25 kyr to better understand the reasons for the establishment of the Arabian Sea OMZ and its response to changes in the Asian monsoon system. Low δ ¹⁵ N values of 4–7 ‰ during the last glacial maximum (LGM) and stadials (Younger Dryas and Heinrich events) suggest that denitrification was inactive or weak during Pleistocene cold phases, while warm interstadials (ISs) had elevated δ ¹⁵ N. Fast changes in upwelling intensities and OMZ ventilation from the Antarctic were responsible for these strong millennial-scale variations during the glacial. During the entire Holocene δ ¹⁵ N values > 6 ‰ indicate a relatively stable OMZ with enhanced denitrification. The OMZ develops parallel to the strengthening of the SW monsoon and monsoonal upwelling after the LGM. Despite the relatively stable climatic conditions of the Holocene, the δ ¹⁵ N records show regionally different trends in the Arabian Sea. In the upwelling areas in the western part of the basin, δ ¹⁵ N values are lower during the mid-Holocene (4.2–8.2 ka BP) compared to the late Holocene (< 4.2 ka BP) due to stronger ventilation of the OMZ during the period of the most intense southwest monsoonal upwelling. In contrast, δ ¹⁵ N values in the northern and eastern Arabian Sea rose during the last 8 kyr. The displacement of the core of the OMZ from the region of maximum productivity in the western Arabian Sea to its present position in the northeast was established during the middle and late Holocene. This was probably caused by (i) reduced ventilation due to a longer residence time of OMZ waters and (ii) augmented by rising oxygen consumption due to enhanced northeast-monsoon-driven biological productivity. This concurs with the results of the Kiel Climate Model, which show an increase in OMZ volume during the last 9 kyr related to the increasing age of the OMZ water mass.

Dissolved inorganic nitrogen (DIN), including nitrate, nitrite and ammonium, frequently acts as the limitation for primary productivity. Our study focused on the transport and transformation of DIN in a tropical estuary, i.e., the Rajang River estuary, in Borneo, Malaysia. Three cruises were conducted in August 2016 and February–March and September 2017, covering both dry and wet seasons. Before entering the coastal delta, decomposition of the terrestrial organic matter and the subsequent soil leaching was assumed to be the main source of DIN in the river water. In the estuary, decomposition of dissolved organic nitrogen was an additional DIN source, which markedly increased DIN concentrations in August 2016 (dry season). In the wet season (February 2017), ammonium concentrations showed a relatively conservative distribution during the mixing, and the nitrate addition was weak. La Niña events induced high precipitations and discharge rates, decreased reaction intensities of ammonification and nitrification. Hence similar distribution patterns of DIN species in the estuary were found in September 2017 (end of the dry season). The magnitude of riverine DIN flux varied between 77.2 and 101.5 t N d−1, which might be an important support for the coastal primary productivity.