Paul Bates

Dr. Paul Bates


Research Focus & Metrics

Academic Career Length

45Years (1982-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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4 August 2005 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
GSGraham Simmons
Graham Simmons
DGDhaval N. Gosalia
Dhaval N. Gosalia
ARAndrew J. Rennekamp
Andrew J. Rennekamp
JRJacqueline D. Reeves
Jacqueline D. Reeves
SDScott L. Diamond
Scott L. Diamond
PBPaul Bates
Paul Bates
Severe acute respiratory syndrome (SARS) is caused by an emergent coronavirus (SARS-CoV), for which there is currently no effective treatment. SARS-CoV mediates receptor binding and entry by its spike (S) glycoprotein, and infection is sensitive to lysosomotropic agents that perturb endosomal pH. We demonstrate here that the lysosomotropic-agent-mediated block to SARS-CoV infection is overcome by protease treatment of target-cell-associated virus. In addition, SARS-CoV infection was blocked by specific inhibitors of the pH-sensitive endosomal protease cathepsin L. A cell-free membrane-fusion system demonstrates that engagement of receptor followed by proteolysis is required for SARS-CoV membrane fusion and indicates that cathepsin L is sufficient to activate membrane fusion by SARS-CoV S. These results suggest that SARS-CoV infection results from a unique, three-step process: receptor binding and induced conformational changes in S glycoprotein followed by cathepsin L proteolysis within endosomes. The requirement for cathepsin L proteolysis identifies a previously uncharacterized class of inhibitor for SARS-CoV infection.

3 December 2021 in Science
Verified
Journal Article
Open access
RGRishi R. Goel
Rishi R. Goel
MPMark M. Painter
Mark M. Painter
SASokratis A. Apostolidis
Sokratis A. Apostolidis
DMDivij Mathew
Divij Mathew
WMWenzhao Meng
Wenzhao Meng
AVA. N. Vanderbeck
A. N. Vanderbeck
Immune memory after vaccination: Vaccination against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has proven highly effective at preventing severe COVID-19. However, the evolution of viral variants, and waning antibody levels over time, raise questions regarding the longevity of vaccine-induced immune protection. Goel et al . examined B and T lymphocyte responses in individuals who received SARS-CoV-2 messenger RNA vaccines. They performed a 6-month longitudinal study of individuals who never had SARS-CoV-2 infection compared with people who had recovered from SARS-CoV-2. Humoral and cellular immune memory was observed in vaccinated individuals, as were functional immune responses against the Alpha (B.1.1.7), Beta (B.1.351), and Delta (B.1.617.2) viral variants. Analysis of T cell activity suggested that robust cellular immune memory may prevent hospitalization by limiting the development of severe disease. —PNK

4 November 2021 in Immunity
Verified
Journal Article
Closed access
MAMohamad-Gabriel Alameh
Mohamad-Gabriel Alameh
ITIstván Tombácz
István Tombácz
EBEmily Bettini
Emily Bettini
KLKatlyn Lederer
Katlyn Lederer
SNSonia Ndeupen
Sonia Ndeupen
Norbert PardiNorbert Pardi
Norbert Pardi

2 April 2021 in Science Immunology
Verified
Journal Article
Open access
PDF file
RGRishi R. Goel
Rishi R. Goel
SASokratis A. Apostolidis
Sokratis A. Apostolidis
MPMark M. Painter
Mark M. Painter
DMDivij Mathew
Divij Mathew
APAjinkya Pattekar
Ajinkya Pattekar
EWE. John Wherry
E. John Wherry
Key differences in both antibody and memory B cell responses to mRNA vaccination were identified on the basis of prior SARS-CoV-2 exposure.

1 September 2021 in Immunity
Verified
Journal Article
Closed access
MPMark M. Painter
Mark M. Painter
DMDivij Mathew
Divij Mathew
RGRishi R. Goel
Rishi R. Goel
SASokratis A. Apostolidis
Sokratis A. Apostolidis
APAjinkya Pattekar
Ajinkya Pattekar
EWE. John Wherry
E. John Wherry

9 March 2004 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
GSGraham Simmons
Graham Simmons
JRJacqueline D. Reeves
Jacqueline D. Reeves
ARAndrew J. Rennekamp
Andrew J. Rennekamp
SASean M. Amberg
Sean M. Amberg
APAndrew J. Piefer
Andrew J. Piefer
PBPaul Bates
Paul Bates
Severe acute respiratory syndrome-associated coronavirus (SARS-CoV) is a rapidly emerging pathogen with potentially serious consequences for public health. Here we describe conditions that result not only in the efficient expression of the SARS-CoV spike (S) protein on the surface of cells, but in its incorporation into lentiviral particles that can be used to transduce cells in an S glycoprotein-dependent manner. We found that although some primate cell lines, including Vero E6, 293T and Huh-7 cells, could be efficiently transduced by SARS-CoV S glycoprotein pseudoviruses, other cells lines were either resistant or very poorly permissive to virus entry. Infection by pseudovirions could be inhibited by several lysosomotropic agents, suggesting a requirement for acidification of endosomes for efficient S-mediated viral entry. In addition, we were able to develop a cell–cell fusion assay that could be used to monitor S glycoprotein-dependent membrane fusion. Although proteolysis did not enhance the infectivity of cell-free pseudovirions, trypsin activation is required for cell–cell fusion. Additionally, there was no apparent pH requirement for S glycoprotein-mediated cell–cell fusion. Together, these studies describe important tools that can be used to study SARS-CoV S glycoprotein structure and function, including approaches that can be used to identify inhibitors of the entry of SARS-CoV into target cells.