OKOTH Patrick Kirsteen, PhD.

Dr. OKOTH Patrick Kirsteen, PhD.

Masinde Muliro University of Science and Technology, Kakamega, Kenya
orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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17 July 2020 in International Journal of Zoology
Verified
Journal Article
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EOElija Odhiambo
Elija Odhiambo
PAPaul O. Angienda
Paul O. Angienda
OKOTH Patrick Kirsteen, PhD.OKOTH Patrick Kirsteen, PhD.
OKOTH Patrick Kirsteen, PhD.
DODavid Onyango
David Onyango
Effects of high stocking densities (HSDs) were evaluated for Nile tilapia fish (Oreochromis niloticus) under culture to determine its influence on plasma cortisol and whole blood glucose concentration. Plasma cortisol levels (ng/ml) were assayed byEnzyme-LinkedImmunosorbentAssay (ELISA). Whole blood glucose levels were determined using a hand-held one touch ultraglucose meter (MD-300) and test strips. Plasma cortisol and whole blood glucose level determinations were replicated three times forO. niloticusreared under both low stocking densities (LSD) and HSD. One way Analysis of Variance (ANOVA) was performed on the data collected, and comparison of significant differences in means was carried out between LSD and HSD at 0.01%. Plasma cortisol levels revealed statistically (P≤0.01) significant values of HSD at 6.32 ± 1.06 ng/ml than in LSD at 4.62 ± 1.58 ng/ml for theO. niloticusgroups studied. Whole blood glucose analysis revealed a statistical (P<0.05) difference in the means in HSD and LSDO. niloticusgroups (F(df,1; 8) = 7.946 > Fcrit = 4.414;P=0.01). Mean plasma glucose concentration was statistically (P≤0.01) higher for HSD than LSDO. niloticusgroups at mean ± SD, 96.84 ± 5.28 and 76.82 ± 5.92, respectively. The findings of this study demonstrate that high stocking densities increase both cortisol and whole blood glucose concentration in tilapia fish, indicating a marked increase in stress levels. Elevated plasma cortisol and whole blood glucose concentration can be used as biomarkers for acute stress inO. niloticusproduced under aquaculture systems. The findings of this study can help inform policy on the management of stress caused by overstocking ofO. niloticusand other related Cichlids under industrial aquaculture production.

16 November 2022 in Cells
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Journal Article
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CWClabe Simiyu Wekesa
Clabe Simiyu Wekesa
GAGeorge Ochieng Asudi
George Ochieng Asudi
OKOTH Patrick Kirsteen, PhD.OKOTH Patrick Kirsteen, PhD.
OKOTH Patrick Kirsteen, PhD.
MRMichael Reichelt
Michael Reichelt
JMJohn Omondi Muoma
John Omondi Muoma
RORalf Oelmüller
Ralf Oelmüller
Rhizobia are soil bacteria that induce nodule formation on leguminous plants. In the nodules, they reduce dinitrogen to ammonium that can be utilized by plants. Besides nitrogen fixation, rhizobia have other symbiotic functions in plants including phosphorus and iron mobilization and protection of the plants against various abiotic stresses including salinity. Worldwide, about 20% of cultivable and 33% of irrigation land is saline, and it is estimated that around 50% of the arable land will be saline by 2050. Salinity inhibits plant growth and development, results in senescence, and ultimately plant death. The purpose of this study was to investigate how rhizobia, isolated from Kenyan soils, relieve common beans from salinity stress. The yield loss of common bean plants, which were either not inoculated or inoculated with the commercial R. tropici rhizobia CIAT899 was reduced by 73% when the plants were exposed to 300 mM NaCl, while only 60% yield loss was observed after inoculation with a novel indigenous isolate from Kenyan soil, named S3. Expression profiles showed that genes involved in the transport of mineral ions (such as K+, Ca2+, Fe3+, PO43−, and NO3−) to the host plant, and for the synthesis and transport of osmotolerance molecules (soluble carbohydrates, amino acids, and nucleotides) are highly expressed in S3 bacteroids during salt stress than in the controls. Furthermore, genes for the synthesis and transport of glutathione and γ-aminobutyric acid were upregulated in salt-stressed and S3-inocculated common bean plants. We conclude that microbial osmolytes, mineral ions, and antioxidant molecules from rhizobia enhance salt tolerance in common beans.

10 October 2022 in Journal of Tropical Medicine
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Journal Article
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HOHarrison Onyango
Harrison Onyango
POPatrick Odhiambo
Patrick Odhiambo
DADavid Angwenyi
David Angwenyi
OKOTH Patrick Kirsteen, PhD.OKOTH Patrick Kirsteen, PhD.
OKOTH Patrick Kirsteen, PhD.
Infectious agents such as SARS-CoV, MERS-CoV, and SARS-CoV-2 have emerged in recent years causing epidemics with high mortality rates. The quick development of novel therapeutic compounds is required in the fight against such pathogenic agents. Unfortunately, the traditional drug development methods are time-consuming and expensive. In this study, computational algorithms were utilized for virtual screening of a library of natural compounds in the ZINC database for their affinity towards SARS-CoV-2 Mpro. Compounds such as cinanserin, nelfinavir, baicalin, baicalein, candesartan cilexetil, chloroquine, dipyridamole, and hydroxychloroquine have the ability to prevent SARS-CoV-2 Mpro from facilitating COVID 19 infection; thus, they treat COVID 19. However, these drugs majorly act to reduce the symptoms of the disease. No anti-viral drug against COVID 19 virus infection has been discovered and approved. Therefore, this study sought to explore natural inhibitors of SARS-CoV-2 Mpro to develop a pharmacophore model for virtual screening of natural compounds in the ZINC database as potential candidates for SARS-CoV-2 Mpro inhibitors and as therapeutic molecules against COVID 19. This study undertook in silico methods to identify the best anti-viral candidates targeting SAR-CoV-2 Mpro from natural sources in the ZINC database. Initially, reported anti-SARS-CoV-2 Mpro molecules were integrated into designing a pharmacophore model utilizing PharmaGist. Later, the pharmacophore model was loaded into ZINCPHARMER and screened against the ZINC database to identify new probable drug candidates. The root means square deviation (RMSD) values of the potential drug candidates informed the selection of some of them, which were docked with SARS-CoV-2 Mpro to comprehend their interactions. From the molecular docking results, the top four candidates (ZINC000254823011, ZINC000072307130, ZINC000013627512, and ZINC000009418994) against SARS-CoV-2 Mpro, with binding energies ranging from 8.2kcal/mol to 8.6kcal/mol, were examined for their oral bioavailability and other pharmacokinetic properties. Consequently, ZINC000072307130 emerged as the only orally bioavailable drug candidate with desirable pharmacokinetic properties. This candidate drug was used to perform MD simulations, and the outcomes revealed that ZINC000072307130 formed a stable complex with the viral main protease. Consequently, ZINC000072307130 emerges as a potential anti-SARS-CoV-2 Mpro inhibitor for the production of new COVID 19 drugs.

22 March 2022 in Journal of Tropical Medicine
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Journal Article
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JWJosephine Wambani
Josephine Wambani
OKOTH Patrick Kirsteen, PhD.OKOTH Patrick Kirsteen, PhD.
OKOTH Patrick Kirsteen, PhD.
Worldwide, transmission of emerging and reemerging malaria infections poses a significant threat to human health in the Sub-Saharan Africa, one that can quickly overwhelm public health resources. While the disease burden of malaria in the Sub-Saharan Africa appears to be on a gradual decline, it is characterized by spatial and temporal variability occasioning a sorry state for the Global South Countries. New evidence on long-term complications of malaria heightens our awareness of its public health impact. Given the likelihood of misdiagnosis, and the unknown levels of malaria transmission across different landscapes, many missed opportunities for prevention occur. Africas population growth, unplanned urbanization, habitat destruction, and trans-border travel are contributing to a rise in the calamitous epidemiology of malaria. Despite empirical statistics demonstrating a downward trend in the malaria disease burden attributable to the scale-up of multiple control strategies, including new diagnostic technologies, malaria remains a global threat to human health in Sub-Sahara Africa. Malaria is a severe public health threat globally, despite several advancements and innovations in its control. Six species of the genus Plasmodium including Plasmodium malariae, Plasmodium falciparum, Plasmodium cynomolgi, Plasmodium knowlesi, Plasmodium ovale, and Plasmodium vivax are known to infect humans. However, greatest disease burden and fatalities are caused by Plasmodium falciparum. Globally, about 3 billion individuals are at risk of contracting malaria disease every year, with over 400,000 fatalities reported in the Sub-Saharan Africa. World Health Organization (WHO) 2018 malaria report indicated that approximately 405,000 mortalities and 228 million cases were reported worldwide, with Africa carrying the highest disease burden. Over the last decade, there has been a significant decline in malaria deaths and infections, which may be related to the availability of effective diagnostic techniques. However, in certain areas, the rate of decline has slowed or even reversed the gains made so far. Accurate diagnosis, adequate treatment, and management of the disease are critical WHO-set goals of eliminating malaria by 2030. Microscopy, rapid diagnostic tests (RDTs), nucleic acid amplification tests (NAATs), and biosensors are all currently accessible diagnostic methods. These technologies have substantial flaws and triumphs that could stymie or accelerate malaria eradication efforts. The cost, ease, accessibility, and availability of skilled persons all influence the use of these technologies. These variables have a direct and indirect ramification on the entire management portfolio of patients. Despite the overall decline in the malaria disease burden driven partly by new diagnostic technologies, a sobering pattern marked by limited number of studies and spatial as well as temporal heterogeneity remains a concern. This review summarizes the principle, performance, gaps, accomplishments, and applicability of numerous malaria diagnostic techniques and their potential role in reducing the malaria disease burden in Sub-Saharan Africa.

25 March 2023 in Genes
Verified
Journal Article
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MGMwaura John Gitau
Mwaura John Gitau
CWClabe Simiyu Wekesa
Clabe Simiyu Wekesa
POPhilip A. Ogutu
Philip A. Ogutu
OKOTH Patrick Kirsteen, PhD.OKOTH Patrick Kirsteen, PhD.
OKOTH Patrick Kirsteen, PhD.
Chronic stress is a serious threat to aquaculture as it lowers fish growth performance and compromises fish welfare. The exact mechanism by which growth is retarded is, however, not clearly understood. This study sought to elucidate the gene expression profiles associated with chronic stress in cultured Nile tilapia (Oreochromis niloticus) reared for 70 days at different ammonia concentrations and stocking densities. Fish in the treatment groups showed negative growth, while the controls showed positive allometric growth. The specific condition factor (Kn) ranged from 1.17 for the controls to 0.93 for the ammonia and 0.91 for the stocking density treatments. RNA was extracted from muscle tissue using TRIzol followed by library construction and Illumina sequencing. Comparative transcriptome analysis revealed 209 differentially expressed genes (DEGs) (156 up- and 53 down-regulated) in the ammonia and 252 DEGs (175 up- and 77 down-regulated) in the stocking density treatment. In both treatments, 24 and 17 common DEGs were up- and down-regulated, respectively. DEGs were significantly enriched in six pathways associated with muscle activity, energy mobilization and immunity. The heightened muscular activity consumes energy which would otherwise have been utilized for growth. These results bring to fore the molecular mechanisms underlying chronic stress’ suppression of growth in cultured Nile tilapia.

31 May 2023 in Agriculture
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Journal Article
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ZOZedekiah Onyando Odira
Zedekiah Onyando Odira
EOElizabeth Omukunda
Elizabeth Omukunda
OKOTH Patrick Kirsteen, PhD.OKOTH Patrick Kirsteen, PhD.
OKOTH Patrick Kirsteen, PhD.
SKSandra Khatiebi
Sandra Khatiebi
SOSolomon Omwoma
Solomon Omwoma
JLJoseph Lalah
Joseph Lalah
Pesticide application in agricultural and residential areas is a worldwide practice. However, human pesticide poisoning and environmental pollution through pesticide residues remain a challenge in the developing world. The present study investigated the intensity of pesticide application in large-scale farms in Trans-Nzoia County to screen and prioritize the pesticides for potential human health and environmental risks. A cross-sectional survey involving 348 farmers was conducted in the study area, and data was analyzed using SPSS. Environmental Exposure Potential (EEP) and Toxicity Potentials (TP) were analyzed from the Pesticide Properties Database (PPDB). Majority (99.4%) of the farms surveyed apply various pesticide classes that include: organophosphates (34.78%), neonicotinoids (15.22%), carbamates (10.87%), pyrethroids (10.87%), organochlorines (8.7%), triazoles (6.5%), copper-based (4.34%), avermectines (2.17%), triazines (2.17%), and amidines (2.17%), with the use of organic manures (26.3%). Despite the high prevalence of pesticide application, only 48.28% of farms conduct soil quality monitoring, 77.3% of whom do not have clear records and schedules for conducting periodic soil analyses. There was a strong positive correlation between the acreage of operation and the use of herbicides in weed management (r = 0.77; p ≤ 0.05). In relation to degradation in the environment, 18.42% of the pesticides applied in the study area were persistent in soil sub-systems while 31.58% are persistent in water. Of the pesticides applied, 18.42% had high chances of bioconcentration in living tissues, 10.53% and 13.16% had the potential of contaminating groundwater and surface water resources, respectively. The ranked-order human toxicity potential associated with the used pesticides were teratogenicity (31.58%), neurotoxicity (28.95%), endocrine disruption (7.9%), carcinogenicity (7.9%), and mutagenicity (2.63%). However, 10.53% of the pesticides possess multiple toxicity potentials. Some farmers (53.70%) surveyed were not aware of the negative environmental impacts of pesticides with 59.50% having prior training on the use and handling of pesticides. Despite the availability of Personal Protective Equipment (PPEs) on larger farms, 31.9% of the farm workers do not adhere to their use during pesticide application. In conclusion, there is low awareness among farmers of human health and environmental risks associated with pesticide application. The study recommends training of farm managers, farm owners, and farm workers on pesticide handling and associated health and environmental effects.