F. Javier Sánchez

Dr. F. Javier Sánchez

Universitat Autònoma de Barcelona
+1
orcid

Research Focus & Metrics

Academic Career Length

26Years (2001-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 July 2015 in Computerized Medical Imaging and Graphics
Verified
Journal Article
Closed access
JBJorge Bernal
Jorge Bernal
FSF. Javier Sánchez
F. Javier Sánchez
GFGloria Fernández-Esparrach
Gloria Fernández-Esparrach
DGDebora Gil
Debora Gil
CRCristina Rodríguez
Cristina Rodríguez
FVFernando Vilariño
Fernando Vilariño

1 September 2012 in Pattern Recognition
Verified
Journal Article
Closed access
JBJ. Bernal
J. Bernal
JSJ. Sánchez
J. Sánchez
FSF. Javier Sánchez
F. Javier Sánchez

2 February 2017 in IEEE Transactions on Medical Imaging
Verified
Journal Article
Open access
JBJorge Bernal
Jorge Bernal
NTNima Tajkbaksh
Nima Tajkbaksh
FSF. Javier Sánchez
F. Javier Sánchez
BMBogdan J. Matuszewski
Bogdan J. Matuszewski
HCHao Chen
Hao Chen
AHAymeric Histace
Aymeric Histace
Colonoscopy is the gold standard for colon cancer screening though some polyps are still missed, thus preventing early disease detection and treatment. Several computational systems have been proposed to assist polyp detection during colonoscopy but so far without consistent evaluation. The lack of publicly available annotated databases has made it difficult to compare methods and to assess if they achieve performance levels acceptable for clinical use. The Automatic Polyp Detection sub-challenge, conducted as part of the Endoscopic Vision Challenge (http://endovis.grand-challenge.org) at the international conference on Medical Image Computing and Computer Assisted Intervention (MICCAI) in 2015, was an effort to address this need. In this paper, we report the results of this comparative evaluation of polyp detection methods, as well as describe additional experiments to further explore differences between methods. We define performance metrics and provide evaluation databases that allow comparison of multiple methodologies. Results show that convolutional neural networks are the state of the art. Nevertheless, it is also demonstrated that combining different methodologies can lead to an improved overall performance.

10 June 2016 in Endoscopy
Verified
Journal Article
Closed access
PDF file
GFGloria Fernández-Esparrach
Gloria Fernández-Esparrach
JBJorge Bernal
Jorge Bernal
MLMaria López-Cerón
Maria López-Cerón
HCHenry Córdova
Henry Córdova
CSCristina Sánchez-Montes
Cristina Sánchez-Montes
FSF. Javier Sánchez
F. Javier Sánchez
Background and aims: Polyp miss-rate is a drawback of colonoscopy that increases significantly for small polyps. We explored the efficacy of an automatic computer-vision method for polyp detection. Methods: Our method relies on a model that defines polyp boundaries as valleys of image intensity. Valley information is integrated into energy maps that represent the likelihood of the presence of a polyp. Results: In 24 videos containing polyps from routine colonoscopies, all polyps were detected in at least one frame. The mean of the maximum values on the energy map was higher for frames with polyps than without (P < 0.001). Performance improved in high quality frames (AUC = 0.79 [95 %CI 0.70 – 0.87] vs. 0.75 [95 %CI 0.66 – 0.83]). With 3.75 set as the maximum threshold value, sensitivity and specificity for the detection of polyps were 70.4 % (95 %CI 60.3 % – 80.8 %) and 72.4 % (95 %CI 61.6 % – 84.6 %), respectively. Conclusion: Energy maps performed well for colonic polyp detection, indicating their potential applicability in clinical practice.

8 September 2017
Verified
Book Chapter
Closed access
PDF file
QAQuentin Angermann
Quentin Angermann
JBJorge Bernal
Jorge Bernal
CSCristina Sánchez-Montes
Cristina Sánchez-Montes
MHMaroua Hammami
Maroua Hammami
GFGloria Fernández-Esparrach
Gloria Fernández-Esparrach
AHAymeric Histace
Aymeric Histace

25 September 2018 in International Journal of Computer Assisted Radiology and Surgery
Verified
Journal Article
Closed access
PDF file
JBJorge Bernal
Jorge Bernal
AHAymeric Histace
Aymeric Histace
MMMarc Masana
Marc Masana
QAQuentin Angermann
Quentin Angermann
CSCristina Sánchez-Montes
Cristina Sánchez-Montes
FSF. Javier Sánchez
F. Javier Sánchez