Motivation: TCS is a widely used haplotype network reconstruction software, but lacks the capability of overlapping genetic with geographic structure, which is often a first step in phylogeographic analysis.

The objectives of this study were to describe the peracaridean fauna associated to the algaeCorallina elongatafrom the Strait of Gibraltar, and explore possible biodiversity and biogeographical patterns of variation along the north–south and Atlantic–Mediterranean axes across the Strait of Gibraltar. Twenty-five stations were selected along the north and south coasts of the Strait to cover the broadest possible range of human pressure and environmental conditions, including both natural rocky shores and artificial breakwaters. The algaCorallina elongatawas selected as substrate, and the peracaridean crustaceans were identified to species level and classified in geographical distribution groups. Univariate and multivariate analyses were conducted to explore and confirm patterns of variation. Forty peracarid species were collected, most of them with an Atlantic–Mediterranean distribution (67%) with only the gammaridParhyale eburnea, being an endemic Mediterranean species. The most common species collected during the present study were the gammaridsHyale stebbingi, Jassa marmorata, Stenothoe monoculoidesandAmpithoespp., the caprellidsCaprella grandimanaandC. penantis, the isopodIschyromene lacazeiand the tanaidTanais dulongi. The number of species per station and the diversity index were significantly higher in the stations located along the north side of the Strait of Gibraltar. However, the two-way ANOVA discarded differences between north and south due to the type of substrate (natural versus artificial) and degree of human pressure. Based on peracaridean assemblages, the Strait of Gibraltar behaves as a whole and homogeneous region, with a very similar faunal composition in all stations and there is not a clear gradient of species substitution from the Mediterranean to the Atlantic stations. Provided that we selected the same substrate in all stations, and that statistical analyses revealed that differences between north and south stations were not due to environmental factors such as anthropogenic stress or type of substrate, we should look to historical biogeographical reasons to explain the higher diversity in the north side of the Strait of Gibraltar.

The dominant intertidal algal species from Tarifa Island, Strait of Gibraltar, together with the associated peracarid crustacean community, were studied over a two-year period (December 2005–December 2007). Gelidium corneum and Gymnogongrus patens were dominant at the lower levels, close to the subtidal. Valonia utricularis, Osmundea pinnatifida, a turf of Caulacanthus ustulatus and Gelidium spp., Corallina elongata and Jania rubens were distributed in intermediate levels, while Ulva rigida, Chaetomorpha aerea and Fucus spiralis were collected from upper levels. The main intertidal seaweeds of Tarifa Island showed a perennial behaviour, but maximum values of biomass were registered during late spring and beginning of summer for most of species while the highest seawater temperatures were measured in late summer and beginning of autumn. Corallina elongata and Jania rubens, the dominant species which shared a niche at platforms of intermediate levels, showed an opposite behaviour, probably to avoid competence: C. elongata showed higher biomass in April–June and lower values in August–October–December, while biomass of J. rubens was higher in December–February and lower in April–August. Associated crustaceans, including mainly amphipods (gammarids and caprellids) were also present throughout the whole year with similar seasonality to seaweeds. However, crustacean density in the intertidal was not only influenced by distribution of algae as substrate, but also by external factors, such as hydrodynamism, oxygen, weather conditions, competition or predation. The present study constitutes the first baseline study dealing with seasonal fluctuations of algae and associated crustaceans in a protected area of the Strait of Gibraltar, an important biogeographical zone between Europe and Africa and the Mediterranean and Atlantic.