Soil is the most complicated biomaterial on the planet. As with any material, the physical habitat is of prime importance in determining and regulating biological activity. However, until recently the opaque nature of soil has meant that any interrogation of its interior architecture has been relatively rudimentary, restricted to simple qualitative expressions of the physical heterogeneity that fail to relate to any specific function. However, new techniques and insights into the biophysical and biochemical processes of this inner space are leading to the developments of theoretical frameworks and experimental approaches that will allow us to sustainably manage Earth's most important resource. We introduce the concept that the soil-microbe system is self-organized and suggest new priorities for research based on an integrative approach that combines biochemistry and biophysics.

Biological soil thin-sections and a combination of image analysis and geostatistical tools were used to conduct a detailed investigation into the distribution of bacteria in soil and their relationship with pores. The presence of spatial patterns in the distribution of bacteria was demonstrated at the microscale, with ranges of spatial autocorrelation of 1 mm and below. Bacterial density gradients were found within bacterial patches in topsoil samples and also in one subsoil sample. Bacterial density patches displayed a mosaic of high and low values in the remaining subsoil samples. Anisotropy was detected in the spatial structure of pores, but was not detected in relation to the distribution of bacteria. No marked trend as a function of distance to the nearest pore was observed in bacterial density values in the topsoil, but in the subsoil bacterial density was greatest close to pores and decreased thereafter. Bacterial aggregation was greatest in the cropped topsoil, though no consistent trends were found in the degree of bacterial aggregation as a function of distance to the nearest pore. The implications of the results presented for modelling and predicting bacterial activity in soil are discussed.

Soil degradation is a critical and growing global problem. As the world population increases, pressure on soil also increases and the natural capital of soil faces continuing decline. International policy makers have recognized this and a range of initiatives to address it have emerged over recent years. However, a gap remains between what the science tells us about soil and its role in underpinning ecological and human sustainable development, and existing policy instruments for sustainable development. Functioning soil is necessary for ecosystem service delivery, climate change abatement, food and fiber production and fresh water storage. Yet key policy instruments and initiatives for sustainable development have under‐recognized the role of soil in addressing major challenges including food and water security, biodiversity loss, climate change and energy sustainability. Soil science has not been sufficiently translated to policy for sustainable development. Two underlying reasons for this are explored and the new concept of soil security is proposed to bridge the science–policy divide. Soil security is explored as a conceptual framework that could be used as the basis for a soil policy framework with soil carbon as an exemplar indicator.

• Plant root mucilages contain powerful surfactants that will alter the interaction of soil solids with water and ions, and the rates of microbial processes. • The lipid composition of maize, lu...