Lin Fang

Dr. Lin Fang

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Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 December 2017 in Science
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TLTea Lenarčič
Tea Lenarčič
IAIsabell Albert
Isabell Albert
HBHannah Böhm
Hannah Böhm
VHVesna Hodnik
Vesna Hodnik
KPKatja Pirc
Katja Pirc
TNThorsten Nürnberger
Thorsten Nürnberger
An extra sugar protects: Many microbial pathogens produce proteins that are toxic to the cells that they are targeting. Broad-leaved plants are susceptible to NLP (necrosis and ethylene-inducing peptide 1–like protein) toxins. Lenarčič et al. identified the receptors for NLP toxins to be GIPC (glycosylinositol phosphorylceramide) sphingolipids (see the Perspective by Van den Ackerveken). Their findings reveal why these toxins only attack broad-leaved plants (so-called eudicots): If the sphingolipid carries just two hexoses, as is the case for eudicots, the toxin binds and causes cell lysis. But in monocots with sphingolipids that have three hexoses, the toxin is ineffective. Science , this issue p. 1431 ; see also p. 1383

28 November 2016 in The Plant Cell
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LFLin Fang
Lin Fang
TIToshiki Ishikawa
Toshiki Ishikawa
EREmilie A. Rennie
Emilie A. Rennie
GMGosia M. Murawska
Gosia M. Murawska
JLJeemeng Lao
Jeemeng Lao
JMJenny C. Mortimer
Jenny C. Mortimer
Identification and characterization of a putative Arabidopsis sphingolipid glycosyltranferase suggests that glycosylation of these crucial lipids affects cellul

1 January 2015 in Carbohydrate Polymers
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LFLin Fang
Lin Fang
JCJeffrey M. Catchmark
Jeffrey M. Catchmark

14 May 2018 in Plant Physiology
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TIToshiki Ishikawa
Toshiki Ishikawa
LFLin Fang
Lin Fang
EREmilie A. Rennie
Emilie A. Rennie
JSJulien Sechet
Julien Sechet
JYJingwei Yan
Jingwei Yan
JMJenny C. Mortimer
Jenny C. Mortimer
Glycosylinositol phosphorylceramides (GIPCs), which have a ceramide core linked to a glycan headgroup of varying structures, are the major sphingolipids in the plant plasma membrane. Recently, we identified the major biosynthetic genes for GIPC glycosylation in Arabidopsis (Arabidopsis thaliana) and demonstrated that the glycan headgroup is essential for plant viability. However, the function of GIPCs and the significance of their structural variation are poorly understood. Here, we characterized the Arabidopsis glycosyltransferase GLUCOSAMINE INOSITOLPHOSPHORYLCERAMIDE TRANSFERASE1 (GINT1) and showed that it is responsible for the glycosylation of a subgroup of GIPCs found in seeds and pollen that contain GlcNAc and GlcN [collectively GlcN(Ac)]. In Arabidopsis gint1 plants, loss of the GlcN(Ac) GIPCs did not affect vegetative growth, although seed germination was less sensitive to abiotic stress than in wild-type plants. However, in rice, where GlcN(Ac) containing GIPCs are the major GIPC subgroup in vegetative tissue, loss of GINT1 was seedling lethal. Furthermore, we could produce, de novo, “rice-like” GlcN(Ac) GIPCs in Arabidopsis leaves, which allowed us to test the function of different sugars in the GIPC headgroup. This study describes a monocot GIPC biosynthetic enzyme and shows that its Arabidopsis homolog has the same biochemical function. We also identify a possible role for GIPCs in maintaining cell-cell adhesion.


29 July 2020 in BMC Genomics
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LFLin Fang
Lin Fang
XXXin Xu
Xin Xu
JLJi Li
Ji Li
FZFeng Zheng
Feng Zheng
MLMingzhi Li
Mingzhi Li
SZSongjun Zeng
Songjun Zeng
Backgrounds: Paphiopedilum is an important genus of the orchid family Orchidaceae and has high horticultural value. The wild populations are under threat of extinction because of overcollection and habitat destruction. Mature seeds of most Paphiopedilum species are difficult to germinate, which severely restricts their germplasm conservation and commercial production. The factors inhibiting germination are largely unknown. Results: In this study, large amounts of non-methylated lignin accumulated during seed maturation of Paphiopedilum armeniacum (P. armeniacum), which negatively correlates with the germination rate. The transcriptome profiles of P. armeniacum seed at different development stages were compared to explore the molecular clues for non-methylated lignin synthesis. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis showed that a large number of genes associated with phenylpropanoid biosynthesis and phenylalanine metabolism during seed maturation were differentially expressed. Several key genes in the lignin biosynthetic pathway displayed different expression patterns during the lignification process. PAL, 4CL, HCT, and CSE upregulation was associated with C and H lignin accumulation. The expression of CCoAOMT, F5H, and COMT were maintained at a low level or down-regulated to inhibit the conversion to the typical G and S lignin. Quantitative real-time RT-PCR analysis confirmed the altered expression levels of these genes in seeds and vegetative tissues. Conclusions: This work demonstrated the plasticity of natural lignin polymer assembly in seed and provided a better understanding of the molecular mechanism of seed-specific lignification process.