Non‐random community changes are becoming more frequent in many ecosystems. In coral reefs, changes towards communities dominated by other than hard corals are increasing in frequency, with severe impacts on ecosystem functioning and provision of ecosystem services. Although new research suggests that a variety of alternative communities (i.e. not dominated by hard corals) exist, knowledge on the global diversity and functioning of alternative coral reef benthic communities, especially those not dominated by algae, remains scattered. In this systematic review and meta‐analysis of 523 articles, we analyse the different coral reef benthic community changes reported to date and discuss the advantages and limitations of the methods used to study these changes. Furthermore, we used field cover data (1116 reefs from the ReefCheck database) to explore the biogeographic and latitudinal patterns in dominant benthic organisms. We found a mismatch between literature focus on coral‐algal changes (over half of the studies analysed) and observed global natural patterns. We identified strong biogeographic patterns, with the largest and most biodiverse biogeographic regions (Western and Central Indo‐Pacific) presenting previously overlooked soft‐coral‐dominated communities as the most abundant alternative community. Finally, we discuss the potential biases associated with methods that overlook ecologically important cryptobenthic communities and the potential of new technological advances in improving monitoring efforts. As coral reef communities inevitably and swiftly change under changing ocean conditions, there is an urgent need to better understand the distribution, dynamics as well as the ecological and societal impacts of these new communities.

Summary: We examined whether the marine macroalga Fucus vesiculosus induces defences against herbivory and, if so, which factors trigger this induction. In addition, we assessed whether induced defences are reduced after consumption stops. Induced effects were measured as changes in palatability rather than changes in the chemistry of the algae. We also tested for reductions in growth rate to determine whether induced defence incurs metabolic costs. We tested whether direct grazing, feeding on neighbouring plants, clipping and presence of a non‐grazing herbivore could trigger induction. The isopod Idotea baltica and the gastropod Littorina littorea were used as herbivores. Both direct feeding of I. baltica and feeding on neighbouring plants induced chemical defence in F. vesiculosus, whereas the snail L. littorea only induced defence by direct grazing. Simulated herbivory (clipping), or the presence of herbivores without grazing, did not lead to defence induction. All induced defences were reversed within 2 weeks of consumption ending. Thus, F. vesiculosus differentiates between physical damage and natural herbivory. Furthermore, feeding by I. baltica on F. vesiculosus releases signals that trigger neighbouring Fucus individuals to induce defence. We found no evidence that metabolic costs incurred as a consequence of induced defence were sufficient to lead to growth reduction. This algal species demonstrates defence plasticity (i.e. induction and reduction of anti‐herbivore defences ‘on demand’), with the response depending on both grazer identity and grazing pattern matter.

For many coastal areas of the world, a decrease in abundance and depth penetration of perennial macroalgae and seagrasses has been documented and attributed to eutrophication. A surplus of nutrients impairs perennial seaweeds in at least two ways: increased phytoplankton densities reduce the depth penetration of light and in addition filamentous seaweeds and microalgae growing epiphytically shade their perennial hosts. A reduction of depth limit and total abundance has also been observed for the brown seaweed Fucus vesiculosus at many sites in the Baltic Sea. However, in most cases the mechanistic reason for the loss of Fucus has been deduced from observations rather than from experimental evidence. Here, we present results of a two-factorial (water depth/light supply and epibionts) experiment that was run in the Kiel Fjord, western Baltic, from August to October 2005. Performance of F. vesiculosus was recorded by growth and chlorophyll measurements, PI-curves and in situ measurements of the photosynthetic activity as the relative rate of electron transport (rETR). rETR and growth decreased with water depth. Chlorophyll a concentrations increased with reduced light intensities, but this apparently could not compensate for the light deficiency. Epibionts enhanced the negative effect of reduced light conditions on growth. According to these findings we estimated the physiological depth limit of F. vesiculosus in the Kiel Fjord to lie between 4 and 6 m water depth.

Sponges (Porifera) are abundant and diverse members of benthic filter feeding communities in most marine ecosystems, from the deep sea to tropical reefs. A characteristic feature is the associated dense and diverse prokaryotic community present within the sponge mesohyl. Previous molecular genetic studies revealed the importance of host identity for the community composition of the sponge-associated microbiota. However, little is known whether sponge host-specific prokaryotic community patterns observed at 97% 16S rRNA gene sequence similarity are consistent at high taxonomic ranks (from genus to phylum level). In the present study, we investigated the prokaryotic community structure and variation of 24 sponge specimens (seven taxa) and three seawater samples from Sweden. Results show that the resemblance of prokaryotic communities at different taxonomic ranks is consistent with patterns present at 97% operational taxonomic unit level.