Ultraslow diffusion is characterized by a logarithmic growth of the mean squared displacement (MSD) as a function of time. It occurs in complex arrangements of molecules, microbes, and many-body systems. This paper reviews mechanical models for ultraslow diffusion in heterogeneous media from both macroscopic and microscopic perspectives. Macroscopic models are typically formulated in terms of a diffusion equation that employs noninteger order derivatives (distributed order, structural, and comb models (CM)) or employs a diffusion coefficient that is a function of space or time. Microscopic models are usually based on the continuous time random walk (CTRW) theory, but use a weighted logarithmic function as the limiting formula of the waiting time density. The similarities and differences between these models are analyzed and compared with each other. The corresponding MSD in each case is tabulated and discussed from the perspectives of the underlying assumptions and of real-world applications in heterogeneous materials. It is noted that the CMs can be considered as a type of two-dimensional distributed order fractional derivative model (DFDM), and that the structural derivative models (SDMs) generalize the DFDMs. The heterogeneous diffusion process model (HDPM) with time-dependent diffusivity can be rewritten to a local structural derivative diffusion model mathematically. The ergodic properties, aging effect, and velocity autocorrelation for the ultraslow diffusion models are also briefly discussed.
How do nonlinear clocks in time and/or space affect the fundamental properties of a stochastic process? Specifically, how precisely may ergodic processes such as fractional Brownian motion (FBM) acquire predictable nonergodic and aging features being subjected to such conditions? We address these questions in the current study. To describe different types of non-Brownian motion of particles—including power-law anomalous, ultraslow or logarithmic, as well as superfast or exponential diffusion—we here develop and analyze a generalized stochastic process of scaled-fractional Brownian motion (SFBM). The time- and space-SFBM processes are, respectively, constructed based on FBM running with nonlinear time and space clocks. The fundamental statistical characteristics such as non-Gaussianity of particle displacements, nonergodicity, as well as aging are quantified for time- and space-SFBM by selecting different clocks. The latter parametrize power-law anomalous, ultraslow, and superfast diffusion. The results of our computer simulations are fully consistent with the analytical predictions for several functional forms of clocks. We thoroughly examine the behaviors of the probability-density function, the mean-squared displacement, the time-averaged mean-squared displacement, as well as the aging factor. Our results are applicable for rationalizing the impact of nonlinear time and space properties superimposed onto the FBM-type dynamics. SFBM offers a general framework for a universal and more precise model-based description of anomalous, nonergodic, non-Gaussian, and aging diffusion in single-molecule-tracking observations.
1 March 2018 in Communications in Nonlinear Science and Numerical Simulation
Fractional calculus models are steadily being incorporated into descriptions of diffusion in complex, heterogeneous materials. Biological tissues, when viewed using diffusion-weighted, magnetic resonance imaging (MRI), hinder and restrict the diffusion of water at the molecular, sub-cellular, and cellular scales. Thus, tissue features can be encoded in the attenuation of the observed MRI signal through the fractional order of the time- and space-derivatives. Specifically, in solving the Bloch-Torrey equation, fractional order imaging biomarkers are identified that connect the continuous time random walk model of Brownian motion to the structure and composition of cells, cell membranes, proteins, and lipids. In this way, the decay of the induced magnetization is influenced by the micro- and meso-structure of tissues, such as the white and gray matter of the brain or the cortex and medulla of the kidney. Fractional calculus provides new functions (Mittag-Leffler and Kilbas-Saigo) that characterize tissue in a concise way. In this paper, we describe the exponential, stretched exponential, and fractional order models that have been proposed and applied in MRI, examine the connection between the model parameters and the underlying tissue structure, and explore the potential for using diffusion-weighted MRI to extract biomarkers associated with normal growth, aging, and the onset of disease.
Using stochastic simulations supported by analytics we determine the degree of nonergodicity of box-confined fractional Brownian motion for both sub- and superdiffusive Hurst exponents . At the nonequivalence of the ensemble- and time-averaged mean-squared displacements (TAMSDs) is found to be most pronounced (with a giant spread of individual TAMSDs at ), with two distinct short-lag-time TAMSD exponents.