Mark Trotter

Prof. Mark Trotter

orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 February 2020 in Remote Sensing
Verified
Journal Article
Open access
PDF file
JBJamie Barwick
Jamie Barwick
DLDavid Lamb
David Lamb
RDRobin Dobos
Robin Dobos
MWMitchell Welch
Mitchell Welch
DSDerek Schneider
Derek Schneider
MTMark Trotter
Mark Trotter
Behaviour is a useful indicator of an individual animal’s overall wellbeing. There is widespread agreement that measuring and monitoring individual behaviour autonomously can provide valuable opportunities to trigger and refine on-farm management decisions. Conventionally, this has required visual observation of animals across a set time period. Technological advancements, such as animal-borne accelerometers, are offering 24/7 monitoring capability. Accelerometers have been used in research to quantify animal behaviours for a number of years. Now, technology and software developers, and more recently decision support platform providers, are integrating to offer commercial solutions for the extensive livestock industries. For these systems to function commercially, data must be captured, processed and analysed in sync with data acquisition. Practically, this requires a continuous stream of data or a duty cycled data segment and, from an analytics perspective, the application of moving window algorithms to derive the required classification. The aim of this study was to evaluate the application of a ‘clean state’ moving window behaviour state classification algorithm applied to 3, 5 and 10 second duration segments of data (including behaviour transitions), to categorise data emanating from collar, leg and ear mounted accelerometers on five Merino ewes. The model was successful at categorising grazing, standing, walking and lying behaviour classes with varying sensitivity, and no significant difference in model accuracy was observed between the three moving window lengths. The accuracy in identifying behaviour classes was highest for the ear-mounted sensor (86%–95%), followed by the collar-mounted sensor (67%–88%) and leg-mounted sensor (48%–94%). Between-sheep variations in classification accuracy confirm the sensor orientation is an important source of variation in all deployment modes. This research suggests a moving window classifier is capable of segregating continuous accelerometer signals into exclusive behaviour classes and may provide an appropriate data processing framework for commercial deployments.

11 January 2018 in Animals
Verified
Journal Article
Open access
PDF file
JBJamie Barwick
Jamie Barwick
DLDavid Lamb
David Lamb
RDRobin Dobos
Robin Dobos
DSDerek Schneider
Derek Schneider
MWMitchell Welch
Mitchell Welch
MTMark Trotter
Mark Trotter
Lameness is a clinical symptom associated with a number of sheep diseases around the world, having adverse effects on weight gain, fertility, and lamb birth weight, and increasing the risk of secondary diseases. Current methods to identify lame animals rely on labour intensive visual inspection. The aim of this current study was to determine the ability of a collar, leg, and ear attached tri-axial accelerometer to discriminate between sound and lame gait movement in sheep. Data were separated into 10 s mutually exclusive behaviour epochs and subjected to Quadratic Discriminant Analysis (QDA). Initial analysis showed the high misclassification of lame grazing events with sound grazing and standing from all deployment modes. The final classification model, which included lame walking and all sound activity classes, yielded a prediction accuracy for lame locomotion of 82%, 35%, and 87% for the ear, collar, and leg deployments, respectively. Misclassification of sound walking with lame walking within the leg accelerometer dataset highlights the superiority of an ear mode of attachment for the classification of lame gait characteristics based on time series accelerometer data.

25 January 2021 in Animals
Verified
Journal Article
Open access
PDF file
EFEloise Fogarty
Eloise Fogarty
DSDavid L. Swain
David L. Swain
GCGreg M. Cronin
Greg M. Cronin
LMLuis E. Moraes
Luis E. Moraes
DBDerek Bailey
Derek Bailey
MTMark Trotter
Mark Trotter
In the current study, a simulated online parturition detection model is developed and reported. Using a machine learning (ML)-based approach, the model incorporates data from Global Navigation Satellite System (GNSS) tracking collars, accelerometer ear tags and local weather data, with the aim of detecting parturition events in pasture-based sheep. The specific objectives were two-fold: (i) determine which sensor systems and features provide the most useful information for lambing detection; (ii) evaluate how these data might be integrated using ML classification to alert to a parturition event as it occurs. Two independent field trials were conducted during the 2017 and 2018 lambing seasons in New Zealand, with the data from each used for ML training and independent validation, respectively. Based on objective (i), four features were identified as exerting the greatest importance for lambing detection: mean distance to peers (MDP), MDP compared to the flock mean (MDP.Mean), closest peer (CP) and posture change (PC). Using these four features, the final ML was able to detect 27% and 55% of lambing events within ±3 h of birth with no prior false positives. If the model sensitivity was manipulated such that earlier false positives were permissible, this detection increased to 91% and 82% depending on the requirement for a single alert, or two consecutive alerts occurring. To identify the potential causes of model failure, the data of three animals were investigated further. Lambing detection appeared to rely on increased social isolation behaviour in addition to increased PC behaviour. The results of the study support the use of integrated sensor data for ML-based detection of parturition events in grazing sheep. This is the first known application of ML classification for the detection of lambing in pasture-based sheep. Application of this knowledge could have significant impacts on the ability to remotely monitor animals in commercial situations, with a logical extension of the information for remote monitoring of animal welfare.

18 January 2022 in Animals
Verified
Journal Article
Open access
PDF file
CECaitlin A Evans
Caitlin A Evans
MTMark Trotter
Mark Trotter
Jaime ManningJaime Manning
Jaime Manning
In Australia, wild dogs are one of the leading causes of sheep losses. A major problem with managing wild dogs in Australia’s rangeland environments is that sheep producers are often unaware of their presence until injuries or deaths are observed. One option for earlier detection of wild dogs is on-animal sensors, such as Global Positioning System (GPS) tracking collars, to detect changes in the behaviour of sheep due to the presence of wild dogs. The current study used spatio-temporal data, derived from GPS tracking collars, deployed on sheep from a single rangeland property to determine if there were differences in the behaviour of sheep when in the presence, or absence, of a wild dog. Results indicated that the presence of a wild dog influenced the daily behaviours of sheep by increasing the daily distance travelled. Differences in sheep diurnal activity were also observed during periods where a wild dog was present or absent on the property. These results highlight the potential for on-animal sensors to be used as a monitoring tool for sheep flocks directly impacted by wild dogs, although further work is needed to determine the applicability of these results to other sheep production regions of Australia.

8 September 2021 in Animals
Verified
Journal Article
Open access
PDF file
CTColin Tobin
Colin Tobin
DBDerek Bailey
Derek Bailey
MSMitchell Stephenson
Mitchell Stephenson
MTMark Trotter
Mark Trotter
Proper grazing management of arid and semi-arid rangelands requires experienced personnel and monitoring. Applications of GPS tracking and sensor technologies could help ranchers identify livestock well-being and grazing management issues so that they can promptly respond. The objective of this case study was to evaluate temporal changes in cattle association patterns using global positioning system (GPS) tracking in pastures with different stocking densities (low stocking density [LSD] = 0.123 animals ha−1, high stocking density [HSD] = 0.417 animals ha−1) at a ranch near Prescott, Arizona. Both pastures contained similar herd sizes (135 and 130 cows, respectively). A total of 32 cows in the HSD herd and 29 cows in the LSD herd were tracked using GPS collars at location fixes of 30 min during a 6-week trial in the summer of 2019. A half-weight index (HWI) value was calculated for each pair of GPS-tracked cattle (i.e., dyads) to determine the proportion of time that cattle were within 75 m and 500 m of each other. Forage mass of both pastures were relatively similar at the beginning of the study and forage utilization increased from 5 to 24% in the HSD pasture and increased from 10 to 20% in the LSD pasture. Cattle in both pastures exhibited relatively low mean association values (HWI < 0.25) at both spatial scales. Near the end of the study, cattle began to disperse likely in search of forages (p < 0.01) and travelled farther (p < 0.01) from water than during earlier periods. Real-time GPS tracking has the potential to remotely detect changes in animal spatial association (e.g., HWI), and identify when cows disperse, likely searching for forage.

21 February 2025 in Animals
Verified
Journal Article
Open access
PDF file
RJRyan Jeon
Ryan Jeon
CRCaleb Rykaczewski
Caleb Rykaczewski
TWThomas Michael Williams
Thomas Michael Williams
WHWilliam Harrington
William Harrington
JKJames E. Kinder
James E. Kinder
MTMark Trotter
Mark Trotter
As the global demand for products from food-producing animals increases with greater household economic capacity, there is an increased emphasis on the development of precision technologies for monitoring the health, product production, and wellbeing of these animals. The present review focuses on pork production. Using these systems is advantageous for enhancing pork production efficiency when trained personnel utilize these technologies to full capacity and have objective, automated, and uninterrupted streams of data collection. While these systems have great potential for revolutionizing food animal production, the nascent stage of computer vision in precision technology has precluded its integration into traditional agricultural practices and systems. In this review paper, there is a focus on the need to (1) evaluate the performance and effective use of computer vision technologies to collect and evaluate reliable data from pork production enterprises; and (2) focus on the current state of sensor-based animal management using a data fusion approach to monitor pig health/performance. Many of these technologies are in various stages of development; therefore, these technologies have not been integrated into pork production or other food animal producing systems. Even though the focus of this review article is on the utilization of these technologies in pork production systems, these technologies are relevant in other food animal production systems, particularly dairy and poultry production. Therefore, we describe an approach that emphasizes the important need for computational capacity and speed, edge computing, data storage and transmission, and maintaining connectivity in rural settings.